Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120932g00006 ATGGGTTCTTCTTCCACCTTGCTGCTGAACGCGTCTTTCCTCATAGTTTTCTCTGCTTTTCTTGTTCTTCACTTCAACTCTCCTTCAGAACACGTTGTTCCTCTGAGAAAGTACCGTTCTACCCTTGGTACCATTGATGAGAATGATTCCTGCAAGAGCTTTCACAGCCTTGCTGACAACGAAGCAAAGTGCTTGTACTTGAAATCCAATGCCCCTTGTGTCACTGAGGGTTATGTTGATTATCTTTACCTTTTTTACTGCAAATTTGGGGATTCAACTTTTCTTGGTCACACCCTTTTGTTCCTTTGGCTATTGGTCTTGTTCTACCTTCTAGCCAACACTGCTTCTGAATACTTTTGTCCTTCCCTTGAGAGCCTCTCAAAATTGCTGAGATTGTCCCCAACAGTTGCTGGGGTTACCCTTCTTTCCCTTGGCAATGGTGCCTGTGATGTTTTTGCAACACTTGTTTCCTTCAATGGCAGTGACACTGATGGTATTGGATTCAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGTGTTGTGGTTGGGATTGTTAGCATATCGGTTAGCCACCAGGGAATTCGGGTTAAGAAGTCTGCACTGATAAGAGATGTATGTTTTCTTCTCTTTGTGCTCTTGTGCTTGTTCGCGATCTTAATCGCTGGCGAGATCAATGTTATTGGGGCAGTTAGCTTCTTTTTGATGTATGTTGTTTATGTGGTTATTGTTTACATCTCGTCGGCCCGGTGTAAGGGTGACTCGCTTGAGGCTACAAGCGATGGCCAATCGAGCAATGGCGATGATTCGGCCGTGCCCCTTCTCAGTGGAATGGAGAAAGGAGTAATTGGTAATGATGAAAATGGATCTCAAGAATGTAATTTCAACTTTGAGGAGAAATACTGCTTCAAGAAATCTCCAATATGTAGATTTTCGCTTTGTGTCTTGGAGTTGCCCCTTTACTTGCCAAGGAGATTGACAATTCCGGTTGTTTATGAAGAGAGATGGTCCAAACCATATGCAATTCTATCAGCTCTGCTAGCCCCATTGCTGTTATCTTCTTTCTGGAACCCGGAAAGCCTAGCAGTCTATGGAATCGGATTATTAATCGGAATCATCTTAGCCGTAGCCGCGTTCTTCACAACCGAGGCATCTAGTCCACCGAAGAGGTACATGCTCCCTTGGCTTGTAGGGGGGTTTGTGATGAGTGTGACATGGAGTTACATCTCAGCTCAAGAACTGGTTGGATTGCTGGTCTCGCTCGGTTACATATGCGGAATTAGTCCTTCAATTTTGGGGCTAACAGTTCTTGCTTGGGGGAATTCAATTGGAGACTTGGTAACAAACTTGACCATGGCATTACATGGTGGAACAGAAGGGGCTCAGATTGCAATATCAGGCTGTTATGCTGGCCCTATATTCAACACTGTAATTGGATTAGGCCTATCCCTTGTATGTTCAACTTGGTCACAGTATCCAAACTCTGTTACTATACCAAGAGATCCATATCTTTGGGAAACACTGGCACTTTTGGTAATTGGATTGATTTGGGCACTTGTGGTGTTGGTAAGAAGGGACATGAAGCTTGATTCACTCTTAGGTGGAGGGCTTCTTGCTGTTTACTTCATTTCAATGTTTCTGAGGCTGATTCAGACATTAGGGTCTTGCCAATTTCAAGATCTATTACCATTTTTATGGTCTTGA 1704 0.439 MGSSSTLLLNASFLIVFSAFLVLHFNSPSEHVVPLRKYRSTLGTIDENDSCKSFHSLADNEAKCLYLKSNAPCVTEGYVDYLYLFYCKFGDSTFLGHTLLFLWLLVLFYLLANTASEYFCPSLESLSKLLRLSPTVAGVTLLSLGNGACDVFATLVSFNGSDTDGIGFNTVLGGASFVSCVVVGIVSISVSHQGIRVKKSALIRDVCFLLFVLLCLFAILIAGEINVIGAVSFFLMYVVYVVIVYISSARCKGDSLEATSDGQSSNGDDSAVPLLSGMEKGVIGNDENGSQECNFNFEEKYCFKKSPICRFSLCVLELPLYLPRRLTIPVVYEERWSKPYAILSALLAPLLLSSFWNPESLAVYGIGLLIGIILAVAAFFTTEASSPPKRYMLPWLVGGFVMSVTWSYISAQELVGLLVSLGYICGISPSILGLTVLAWGNSIGDLVTNLTMALHGGTEGAQIAISGCYAGPIFNTVIGLGLSLVCSTWSQYPNSVTIPRDPYLWETLALLVIGLIWALVVLVRRDMKLDSLLGGGLLAVYFISMFLRLIQTLGSCQFQDLLPFLWS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120932g00006 567 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 10 556 - -
Stsc120932g00006 567 Gene3D - 340 549 IPR044880 -
Stsc120932g00006 567 Gene3D - 132 263 IPR044880 -
Stsc120932g00006 567 Pfam Sodium/calcium exchanger protein 101 245 IPR004837 GO:0016020|GO:0055085
Stsc120932g00006 567 Pfam Sodium/calcium exchanger protein 396 548 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120932g00006 Stsc-Chr120932 30853 33193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120932g00006 47 554 Antiporters AT5G17860 48.549 1.74e-157 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120932g00006 K13754 - gmx:100787016 731.48