Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120928g00007 ATGTCAAGCATCATATCATTCCCTTTCAGAGAAGCAGTTGCTGATGTTGAGTACAAGGGGTTCCTTATACCAAAAGGGTGGAAAGCAATGCCATTGTTTAGAAATATTCATCACAATCCAGAATTTTTCTCTGAGCCACAGAAATTCAACCCATCCAGGTTTGAGGTTACACCAAAACCCAATACATTCATGCCATTTGGAAGTGGAGTACATGCCTGCCCCGGTAATGAGCTAGCAAAGCTTGAGACGATGATTATGGTCCATCATTTGGTCACCAAGTTTAGGTGGGAATTGGTAGGATCAGAATGTAGGATTCAATATGGGCCATTCCCATTGCCATTGAATGGACTTCCTACCAAATTTTGGAGAGAATCTACCACCTACAATTGA 390 0.4179 MSSIISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFSEPQKFNPSRFEVTPKPNTFMPFGSGVHACPGNELAKLETMIMVHHLVTKFRWELVGSECRIQYGPFPLPLNGLPTKFWRESTTYN 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120928g00007 129 Pfam Cytochrome P450 7 99 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120928g00007 129 Gene3D Cytochrome P450 1 123 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120928g00007 129 SUPERFAMILY Cytochrome P450 4 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120928g00007 129 PRINTS E-class P450 group I signature 63 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120928g00007 129 PRINTS E-class P450 group I signature 73 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120928g00007 129 PRINTS E-class P450 group I signature 32 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120928g00007 129 PANTHER CYTOCHROME P450 26 1 109 - -
Stsc120928g00007 129 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 66 75 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120928g00007 Stsc-Chr120928 35104 37970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120928g00007 1 125 Cytochrome P450 AT3G19270 75.200 5.80e-67 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120928g00007 K09843 - gmx:100815135 253.447