Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120923g00015 ATGGCAACCGAAACAGCAGGAGCAGTAGCTGAATTGTCCACGGCGGCGCCCGTTCCTTCGCCGGCACCGGAGGCTGGATCGAAACACAAGCTAGAGAGGAAGTGGACGTTCTGGTTCGACAACCAATCAAAGCCGAAGCAAGGCGCCGCTTGGGGCACCTCTCTCCGCGAGGTTTACACCTTCGATACTGTCGAAGAGTTCTGGTGTTTGTATGATCAGGTATTCAAGCCCAGCAAATTGCCTGGTAATGCGGACTTCCACTTGTTCAAGACTGGGATTGAGCCAAAATGGGAAGATCCTGAGTGTGCAAAGGGAGGCAAGTGGACTGTCACAAGCAACAGGAAGGCTAATCTTGATAGCATGTGGCTCGACACTATGATGGCTTTGATTGGGGAGCAATTTGACGATGCTGAGGACATATGTGGTGTGGTTGCGAGTGTGCGCCAGAGGCAGGACAAACTTTCGCTATGGACAAAGACAGCAGCAAACGAGGCAGCCCAGATGGGCATTGGAAGGAAGTGGAAGGAGATAATTGATGTTACTGACAAGATAATATACAACTTTCATGATGATTCTAGAACTCGATCATCGAAGTCTCGGTACAGTGTATAA 612 0.5 MATETAGAVAELSTAAPVPSPAPEAGSKHKLERKWTFWFDNQSKPKQGAAWGTSLREVYTFDTVEEFWCLYDQVFKPSKLPGNADFHLFKTGIEPKWEDPECAKGGKWTVTSNRKANLDSMWLDTMMALIGEQFDDAEDICGVVASVRQRQDKLSLWTKTAANEAAQMGIGRKWKEIIDVTDKIIYNFHDDSRTRSSKSRYSV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120923g00015 203 FunFam Eukaryotic translation initiation factor 4E 20 203 - -
Stsc120923g00015 203 MobiDBLite consensus disorder prediction 1 27 - -
Stsc120923g00015 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 85 108 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Stsc120923g00015 203 Pfam Eukaryotic initiation factor 4E 30 183 IPR001040 GO:0003723|GO:0003743|GO:0006413
Stsc120923g00015 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 22 196 IPR001040 GO:0003723|GO:0003743|GO:0006413
Stsc120923g00015 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 22 203 IPR023398 -
Stsc120923g00015 203 SUPERFAMILY eIF4e-like 13 198 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120923g00015 Stsc-Chr120923 77927 81286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120923g00015 17 203 Eukaryotic Initiation Factors Gene Family AT5G35620 66.327 1.24e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120923g00015 K03259 - sind:105158602 343.584