Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120922g00009 ATGAGCATGGATAAAATTGTGTTAGGAACAGCAACAAAATCATTTCATGTTAATAATAATAATAAGGGCATAATAGGAGTTGTTGCAGGCAATAGTGTCAGAAGTGGAAAAGAGGAGATAGTGGGTATTGAGATTGCATTGGAGGATTTCTATCATTACACAAATCGAAGGTTTGCTCTTCACATAAGAGACTCTCATGGGGATCCCCTTAAAGCTGCTCTTTCAGCTGCACATTATGCTGCACGGACTGTGGCACTAGCCATGAGTCAAACCAACAAAAATGAAGGTGGCCAATTCCTGATGAACAAGATTCTGCATAGTAATTTCCTTGGCCAAAAAGGAAGAATTCAATTCCACAATCATACCTATGATCCTACAAATACTTTTCAAATCATCAATGTGATTGGGAAGGAGTACAAGGAGATTGGTTGTAGGTCAAGTGGACTTGGATTTTCAAGCAATATTGGTGAACATGAAGCTAGTTATAATTCTTCAATGAAGGAACTAGAACAGGTTATGTGGCCAGGTAGACCTTGGGAAACTCCAATAGGGTGGGCCCTACCAACAGTTGAGAAGCAATTCATAAACATAACTCAATGTCAATTTGAGGGATTCACCATTGATCTCTTCAAAGCAACTGTGGAATTGATGCCCTACCATGTTCCATACAAGTTCTATGCTTTTAATGATACATATGATGAGTTGGTCAGGCAAATTTATTTGAAGGACACAATGCAGATATATGGAGCATTGTTCATGAACATTCTTGGATTTGTGGTGATATCTATTCTGATATATGTGAGGGATATAACATGGGAGTTCCCAGCAGAGGTTCTTGTTGTGGCCATTGTTTGTGCTCTCATGGGGATTGCTGCTAGCTTCCGCCATACTGTTCCTCTTTGGACATCAACCCCTGCATACCTCTTACTCCTTTTATCATTTCTCTTTGTTTTTGTTCTCAAAGATGTCCTCAATTATGTTTAG 984 0.3923 MSMDKIVLGTATKSFHVNNNNKGIIGVVAGNSVRSGKEEIVGIEIALEDFYHYTNRRFALHIRDSHGDPLKAALSAAHYAARTVALAMSQTNKNEGGQFLMNKILHSNFLGQKGRIQFHNHTYDPTNTFQIINVIGKEYKEIGCRSSGLGFSSNIGEHEASYNSSMKELEQVMWPGRPWETPIGWALPTVEKQFINITQCQFEGFTIDLFKATVELMPYHVPYKFYAFNDTYDELVRQIYLKDTMQIYGALFMNILGFVVISILIYVRDITWEFPAEVLVVAIVCALMGIAASFRHTVPLWTSTPAYLLLLLSFLFVFVLKDVLNYV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120922g00009 327 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 47 245 IPR015683 -
Stsc120922g00009 327 Gene3D - 11 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120922g00009 Stsc-Chr120922 69419 71274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120922g00009 94 318 Ion Channels AT4G35290 26.984 3.13e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120922g00009 - - gmx:100799573 222.631