Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120919g00022 ATGGAACACAATTTCTACCTCTCCCTTCTACTTGTCTTTGTTTCATTCGTAACTCTTTCATTCTTCTTCCTCTTCTACCGTCACAGGTCTCCATTCACGGCACCAAACCTGCCACCGGGAAGGATCGGATACCCCTTGCTCGGCGAGAGCCTCGAGTTCATGTCCACCGGATGGATGGGCCATCCGGAGAAGTTCATCTTCGATCGCATCATCAGGTTTTCCTCTGAAATCTTCAAGACCTCAATCTTTAACGAACCCACCGTTGTGCTGTGCGGGCCCACATGCAACAAGTTCTTGTTCTCCAACGAGAACAAGCTTGTTAACGCATGGTGGCCCGAGAACGTTAACAAGATCTTCCCATCCACGCGTCAGACTGATTCCAAAGAGGAGTCCAAGAAGATGAGGAAGTTGCTGCCGCAGTTCCTGAAACCTGAAGCTCTCCAACGTTATGTTGGCATCATGGATTCCATTGCTCAGAGGCATTTTGCTTCCCATTGGGACAACAACACGCATATCACCGTTTTTCCTTTGGCCAAGAGGTACACGTTCTTGTTAGCTTGTCGTTTGTTCATGAGTGTGGAGGACGGAAAGGAGGTAGAAAAAATAGAAGGGCCTTTCCACCGTTTGGCTTCAGGAATCATGTCACTGCCGATAGACTTGCCAGGAACGGCATTCAACAAAGGAATAAAAGCGTCAAAGTTCATAAGGAATGAACTTTTGAGGATCATTAAGCAGAGAAAGGTGGATTTGGGAGAAGGGAAAGCCCTTCCAACACAAGACATATTATCTCACATGCTGTTGACACCAAATGAGGATGGGCGTTACATGAATGAAATGGATATTGCTGATAAGATCCTTGGCCTTTTGATTGGAGGCCATGACACTGCTAGTGCTGCATGCACTTTCATTGTCAAATACCTTGCTGAGCTTCCTCATATTTATGATCAAGTATACAAAGAGCAAATGGAAATAGCAAAATCAAAATGTGAAGGAGAGTTGTTAACTTGGGATGATGTCCAAAAGATGCGATACTCTTGGAATGTAGCTTGTGAAGTAATGAGACTTGCTCCTCCACTCCAGGGAGGTTTCAGGGAAGCCATCAATGACTTCGTCTTTAATGGCTTCTCAATTCCGAAAGGATGGAAGCTGTATTGGAGTGCAAATTCGAGTCATAAGAATCCAGAATATTTTCCAGAGCCACAGAAATTCGATCCAAGTAGATTCGAAGGGAAAGGACCAGTTCCTTACACTTATGTGCCATTTGGTGGAGGACCAAGGATGTGCCCTGGTAAAGAGTATGCAAGATTGGAAATACTGGTTTTCATGCACAATTTAGTCAAACGCTATAAGTGGCAAAAATTGATTCAAGATGAAAAGATTATTGTTGATCCAATGCCTGTACCTGCAATGGGCCTTCCAATTCGCCTTATTCCTCACAAAGCCTAA 1446 0.4454 MEHNFYLSLLLVFVSFVTLSFFFLFYRHRSPFTAPNLPPGRIGYPLLGESLEFMSTGWMGHPEKFIFDRIIRFSSEIFKTSIFNEPTVVLCGPTCNKFLFSNENKLVNAWWPENVNKIFPSTRQTDSKEESKKMRKLLPQFLKPEALQRYVGIMDSIAQRHFASHWDNNTHITVFPLAKRYTFLLACRLFMSVEDGKEVEKIEGPFHRLASGIMSLPIDLPGTAFNKGIKASKFIRNELLRIIKQRKVDLGEGKALPTQDILSHMLLTPNEDGRYMNEMDIADKILGLLIGGHDTASAACTFIVKYLAELPHIYDQVYKEQMEIAKSKCEGELLTWDDVQKMRYSWNVACEVMRLAPPLQGGFREAINDFVFNGFSIPKGWKLYWSANSSHKNPEYFPEPQKFDPSRFEGKGPVPYTYVPFGGGPRMCPGKEYARLEILVFMHNLVKRYKWQKLIQDEKIIVDPMPVPAMGLPIRLIPHKA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120919g00022 481 Gene3D Cytochrome P450 28 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PANTHER CYTOCHROME P450 26 37 468 - -
Stsc120919g00022 481 CDD CYP90-like 69 478 - -
Stsc120919g00022 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 Pfam Cytochrome P450 38 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Stsc120919g00022 481 FunFam Taxadiene 5-alpha hydroxylase 28 479 - -
Stsc120919g00022 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120919g00022 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120919g00022 Stsc-Chr120919 106361 110683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120919g00022 27 383 Cytochrome P450 AT5G36110 60.000 2.76e-152 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120919g00022 K20667 - gmx:100801007 823.157