Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120919g00017 ATGTCAAGGTCGTTGTTAGCAGAGAAGCTCGGAGCAGCAGGGCGGGTGGTGGCGGTGGCAATTGAGAACAACAAAACAAGCCAGGAAGCAGCAAAATGGACAGTTGATAATCTTCTTCCCAAAGACCAATGTCTCGTACTTATCCATGTTAGACAACAAGCATCTTCCATTCCATCACCATTTGGAAACCTTTTACCCGTTGATGGAGACGATGATGTGGGAAGAGCATACAAACAACAAATGGAGAACGAAACCAAAGAGCTTTTCAGCTCATTTCGTGTCTTCTGCAACAGAAAAAATATACAATGCAAAGAAATCTTGGTGGAAGACACAGATATATCTAAGGCGATAATAGAAAGCATCACAACTTATTCAATTGAACTTTTAGTACTTGGATCATCAAGGAGCGGCTTTCTCAAAAAAATCAGGGGAGTGGAGGTTCCAAACCTAGTATCAAAAGGAGCACCACCATTCTGCACTGTGTACATTATTAACAAAGGAAAGATCTCATCAGTGAGATATTCAACTGTTCAATTATCTGTTAGACCCCAGAACAGCATATTGCAATTGCAATCTCAGTCTCAGTATCACTCTTCTCAGTCGTCCCAGTCTCAGTTCCAGGCCGATTCGCGACCGATGCGCAACCACCCTCCACGGCCATTTGAGAAGCCTGGATACCTTGGACGGCAGTCATTGGAGGACTACTCAATCTCAGTCAATAAAATTGGTAGAGCAGACCCCAAACCATATGAACCGTTGATGACTCAATGTGATATCTCATTCGTGAATGGAAGGCCAGGGTTTGATAAGTTGTTCCCTTCATTGTATGACGAAAGTGTGGATGATGGAGCTCCCCCTCGTCTTTCTTTGGGATCTGACTCTGGAACTAACCTTCAAGACTGCACTTTTACTGCACAAGACACATCTAATTTCAGTGATGTCTACTCTTTTAATTCACAAGACAGTGGAGCACCATCAAACGAACCTGTTTTGGATGAAGTTGAAAGTGAAATGAGAAAACTTAAGCTGGAACTGGAGAAGTCAATGGATCTGTATAGCACAGCTTGCAAGGATGCTTTGGTAGCAAAGCAGAAGGCATTGGAACTTCGAAGGTTGAAAATGCGAGAACATAAGAAGTTTGATGAGGATCAAACTACTGAAAAAGCAGAACTGGAAGTGGCTGTGAAGGAGAAAGCAAAGTCCAGAGCTGCCTCGGATGCAGCAGAAGTCTCTAGAAAGATAGCAGAGTTGGAAGCTCAGAAAAGAATGAATGCTGAGATGAGAATAATCAGAACAGAACCGGAGGCAAAGAAGTCAGGAGAGAGTTTCTTGTATGGTGGTCCTGCAAGGTACAGAAGATACACCATTGAGGAAATTGAAGAAGCTACAAGAGGCTTCTCAAACGCTCTCAAGGTTGGTGAAGGAGGTTATGGTCCAGTTTACAAGTGTGAACTAGATCACACACAAGTTGCAATCAAAGTGCTAAAGACAAATGCAACTCAAGGATGGTCACAGTTTCACCAAGAGATTGAGGTTCTAAGTTGCATAAGGCATCCAAACATGGTTCTTCTGCTTGGAGCATGCCCAGAGATTGGATGTTTAGTATATGAGTACATGGCTAATGGAAGCTTAGACGATTGCCTGTTCCACAGAGGCAATGCACCAGTGCTTCCATGGCAGTTAAGATTCAGAATTGCTGCTGAGATTGCAACTGCACTTCTTTTCCTCCACCAGACAAAGCCAGAGCCACTGGTGCACCGTGACTTGAAACCTGGAAACATTTTGCTTGATAGGAACATGGTGAGCAAGATTGGTGATGTTGGGTTAGCTAGGCTTGTGCCTCCTTCAGTTGCAGACATTGCAACACAGTATAGACAGACATCAACTGCAGGAACTTTCTGCTACATTGATCCTGAGTACCAGCAAACTGGGATGCTTGGACTCAAGTCTGATATTTACTCACTGGGAGTCATGCTTCTGCAGATCATAACTGCAAGGTCACCAATGGGTTTGACTCATCAGGTTGCTAAGGCCATTCAGAGAGGCACTTTTGCTGAAATGCTTGACCCTGCTGTTGAGGATTGGCCAGTTCAACATGCCTTGCATTTTGCAAGGATTGGCCTCAGCTGTGCTGAGATGAGAAGAAAAGATAGACCTGATCTTGCAAAATTTGTATTGCCTGAGTTAAACAAGCTCAGCCAATTTGCTGAAGAAAACATGCCTATGATGATGATGTTCGGTGTTGGAGCAAGATTCGCTTCTCTGTCTAGAACACCTTCCACAATTCAAGACACGAGTGAAACTCAATCGATCTCAGGAATCTCTGAAGGTAGCCACTCAAGCACGCAGTCAATGGAGAAAATTTGA 2367 0.4381 MSRSLLAEKLGAAGRVVAVAIENNKTSQEAAKWTVDNLLPKDQCLVLIHVRQQASSIPSPFGNLLPVDGDDDVGRAYKQQMENETKELFSSFRVFCNRKNIQCKEILVEDTDISKAIIESITTYSIELLVLGSSRSGFLKKIRGVEVPNLVSKGAPPFCTVYIINKGKISSVRYSTVQLSVRPQNSILQLQSQSQYHSSQSSQSQFQADSRPMRNHPPRPFEKPGYLGRQSLEDYSISVNKIGRADPKPYEPLMTQCDISFVNGRPGFDKLFPSLYDESVDDGAPPRLSLGSDSGTNLQDCTFTAQDTSNFSDVYSFNSQDSGAPSNEPVLDEVESEMRKLKLELEKSMDLYSTACKDALVAKQKALELRRLKMREHKKFDEDQTTEKAELEVAVKEKAKSRAASDAAEVSRKIAELEAQKRMNAEMRIIRTEPEAKKSGESFLYGGPARYRRYTIEEIEEATRGFSNALKVGEGGYGPVYKCELDHTQVAIKVLKTNATQGWSQFHQEIEVLSCIRHPNMVLLLGACPEIGCLVYEYMANGSLDDCLFHRGNAPVLPWQLRFRIAAEIATALLFLHQTKPEPLVHRDLKPGNILLDRNMVSKIGDVGLARLVPPSVADIATQYRQTSTAGTFCYIDPEYQQTGMLGLKSDIYSLGVMLLQIITARSPMGLTHQVAKAIQRGTFAEMLDPAVEDWPVQHALHFARIGLSCAEMRRKDRPDLAKFVLPELNKLSQFAEENMPMMMMFGVGARFASLSRTPSTIQDTSETQSISGISEGSHSSTQSMEKI 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120919g00017 788 CDD STK_N 16 167 - -
Stsc120919g00017 788 SMART serkin_6 466 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120919g00017 788 MobiDBLite consensus disorder prediction 190 227 - -
Stsc120919g00017 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Stsc120919g00017 788 Coils Coil 400 420 - -
Stsc120919g00017 788 Pfam Protein kinase domain 470 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120919g00017 788 SUPERFAMILY Protein kinase-like (PK-like) 446 723 IPR011009 -
Stsc120919g00017 788 ProSiteProfiles Protein kinase domain profile. 466 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120919g00017 788 Pfam Universal stress protein family 15 142 IPR006016 -
Stsc120919g00017 788 Gene3D Transferase(Phosphotransferase) domain 1 539 745 - -
Stsc120919g00017 788 MobiDBLite consensus disorder prediction 759 788 - -
Stsc120919g00017 788 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 142 - -
Stsc120919g00017 788 PANTHER OS02G0152300 PROTEIN 16 786 - -
Stsc120919g00017 788 Gene3D Phosphorylase Kinase; domain 1 447 538 - -
Stsc120919g00017 788 FunFam U-box domain-containing protein 51 539 739 - -
Stsc120919g00017 788 MobiDBLite consensus disorder prediction 190 211 - -
Stsc120919g00017 788 Coils Coil 331 351 - -
Stsc120919g00017 788 Gene3D HUPs 15 164 IPR014729 -
Stsc120919g00017 788 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 446 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120919g00017 Stsc-Chr120919 70331 73516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120919g00017 17 774 Receptor kinase-like Gene Family AT5G35380 50.914 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Stsc120919g00017 Pkinase 3.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120919g00017 - - ahf:112790757 1250.73