Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120915g00010 ATGGAAGGAAACAACAACAACAACAATGGTGGATGCTGTTGTGGAAGTTTTGTTCAGAGGTGCAAGCCTTACATAGCAATGATATCTCTGCAATTTGGGTATGCTGGGATGAACATAATCACAAAGGTTTCCCTCAACCGTGGCATGAGCCACTATGTTCTTGTTGTCTATAGACATGCCTTTGCCACTGCTGCTATTGCTCCCTTTGCTCTTGTTCTTGAGAGGAAAGTCAGACCTAAGATCACATTCCTTATGTTCATGCAAATGTTTGTCTTGGGTCTTCTTGGGCCTGTGATTGATCAGAACTTATACTATATGGGTTTGAAATTTACATCCCCAACATACTCTTGTGCTATAAGCAACATGCTCCCTGCAATGACGTTCGTCATGGCGGTTATCTTCAGGATGGAGAAATTGGACATGAGGAAAGTGAGGTGCCAAGCTAAGGTGATTGGAACAGCTGTAACTGTAGCTGGGGCAATGTTAATGACATTGTACAAAGGGAAAGTCATTAACTTCTTCTGGTCTAGTTACATGCACCACCCAAGAAACTATGTGCCTGATAACAGCACCAACACTTCTGCATCTGGTGAAACTGATTGGGTGAAGGGTTCTATTCTTCTCATATTTGCTACCCTTGCTTGGGCTTCCTTCTTCATCCTTCAGGCAGTGACATTAAGAAAATACTCAGCTCAGCTTTCTCTAACTGCCATAGTGTGTTTCTTGGGAACACTGCAATCAATTGCAGTTACCTTTGTCATGGAGCATAGTCCTAATGTTTGGACCATTGGCTGGGACATGAACTTGCTAGCTGCAGCCTATGCTGGAATAGTGTCATCAGGTATAGCATACTATGTTCAAGGGATAGTGATGCAAAGAAGAGGACCAGTTTTTGTGACTGCTTTCAGCCCTTTGATGATGATCATTGTAGCTGTTATGGGATCTTTCATCCTTGCAGAAAACATATACCTTGGAGGTGTGATTGGAGCAATTCTTATAGTAGTGGGACTCTACTCAGTTCTATGGGGGAAATACAAGGAGCACAAAGAGAAAGAAGCAGAAAATATCATCACTGTTGATGAACCAATTAAGTGCTGTGTTGATGACCAAATTATTGGAAGGTTGGAAACAGTGATTGAAGATTCAGAATCAAATGACATTGAGATGCAAAAGGGTGATCATAATGAAGCTTGCAAAGAACTAAGCCTAACAATAATTAGTAACAACAACAACAACAAAAATAATGATGATGATGATGTTACCAAAGCTTGA 1272 0.4112 MEGNNNNNNGGCCCGSFVQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQMFVLGLLGPVIDQNLYYMGLKFTSPTYSCAISNMLPAMTFVMAVIFRMEKLDMRKVRCQAKVIGTAVTVAGAMLMTLYKGKVINFFWSSYMHHPRNYVPDNSTNTSASGETDWVKGSILLIFATLAWASFFILQAVTLRKYSAQLSLTAIVCFLGTLQSIAVTFVMEHSPNVWTIGWDMNLLAAAYAGIVSSGIAYYVQGIVMQRRGPVFVTAFSPLMMIIVAVMGSFILAENIYLGGVIGAILIVVGLYSVLWGKYKEHKEKEAENIITVDEPIKCCVDDQIIGRLETVIEDSESNDIEMQKGDHNEACKELSLTIISNNNNNKNNDDDDVTKA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120915g00010 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 346 - -
Stsc120915g00010 423 Pfam EamA-like transporter family 24 164 IPR000620 GO:0016020
Stsc120915g00010 423 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020
Stsc120915g00010 423 PANTHER WAT1-RELATED PROTEIN 22 351 IPR030184 GO:0016020|GO:0022857
Stsc120915g00010 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120915g00010 Stsc-Chr120915 78628 81307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120915g00010 14 395 Nodulin-like Gene Family AT5G07050 65.195 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120915g00010 - - gmx:100793545 627.861