Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120915g00001 ATGGCTTTTCTTACCATGATCATACCCCTCTCCCTCGTAGCACTTCTTCTTTACAAGCTCTATTTCAGGTTAAGGTTCAAGCTCCCACCGGGCCCACGTCCGTTGCCAGTCGTTGGAAACCTCTATGACATAAAGCCCGTGAGGTTCCGATGCTTCGCGGAGTGGGCCCAATCCTACGGCCCAATAATCTCGGTGTGGTTTGGATCGACTTTGAACGTGATTGTTTCGAACTCTGAGCTGGCAAAGGAGGTGCTGAAGGAGCATGATCAGCAGCTGGCGGACCGGCACAGGAGCCGGTCGGCGGCGAAGTTTAGCCGGGACGGGAAGGACCTGATTTGGGCCGATTATGGGCCTCACTACGTGAAGGTGAGGAAGGTTTGCACACTTGAGCTCTTCTCACCGAAAAGGCTGGAGTCTTTGAGACCTATAAGAGAAGATGAGGTCACTGCCATGGTTGAATCCATTTTCAATGACTGCACCAATTCTGAAAACTTAGGGAAAAGTTTGTTGGTTAAGAAGTACTTGGGAGCAGTGGCATTCAACAACATCACTAGGCTAGCATTTGGCAAAAGGTTTGTGAACTCAGAAGGTATAATGGATGAGCAAGGAGTAGAATTCAAGGCTGTAGTTGCAAATGGATTGAAGCTAGGTGCATCTCTGGCCATGGCCGAGCACATTCCGTGGCTACGATGGATGTTCCCACTTGAAGAGGAAGCTTTCGCAAAGCACGGTGCTCGCCGCGACAAACTGACCAGAGCCATCATGGAAGAGCACACTCAGGCGCGGCTGAAATCCGGTGCCAAGCAACATTTTGTTGATGCCCTCCTCACATTGCAAGACAAATATGACCTTAGTGAAGACACCATCATTGGTCTACTTTGGGACATGATTACCGCTGGCATGGACACAACAGCAATATCAGTTGAGTGGGGCATGGCTGAACTAGTCAAGAACCCAAGAGTCCAACAAAAAGCCCAAGAGGAGCTAGACAGGGTAATCGGGCTTGAAAGGATAATGACCGAATCAGATTTCTCAAGCCTCCCATACCTACAATGTGTGGCAAAGGAAGCCCTAAGGCTCCACCCACCAACCCCACTAATGCTCCCACACAGGGCCAACAGCAACGTCAAAGTTGGTGGCTATGACATACCGAAAGGCTCCAACGTGCACGTGAACGTGTGGGCAGTGGCACGTGACCCAGCTGTATGGAAAAACCCACTTGAGTTCAGGCCCGAGAGGTTCCTTGAGGAGGATGTGGACATGAAGGGGCATGATTTTAGGCTGCTCCCTTTTGGTGCTGGACGTAGGGT 1310 0.5076 MAFLTMIIPLSLVALLLYKLYFRLRFKLPPGPRPLPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLESLRPIREDEVTAMVESIFNDCTNSENLGKSLLVKKYLGAVAFNNITRLAFGKRFVNSEGIMDEQGVEFKAVVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDKLTRAIMEEHTQARLKSGAKQHFVDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWGMAELVKNPRVQQKAQEELDRVIGLERIMTESDFSSLPYLQCVAKEALRLHPPTPLMLPHRANSNVKVGGYDIPKGSNVHVNVWAVARDPAVWKNPLEFRPERFLEEDVDMKGHDFRLLPFGAGRRV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120915g00001 437 CDD CYP98 59 437 - -
Stsc120915g00001 437 FunFam Cytochrome P450 22 437 - -
Stsc120915g00001 437 Gene3D Cytochrome P450 23 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 428 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 Pfam Cytochrome P450 29 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PRINTS P450 superfamily signature 429 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120915g00001 437 PANTHER CYTOCHROME P450 98A9 11 437 - -
Stsc120915g00001 437 SUPERFAMILY Cytochrome P450 29 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120915g00001 Stsc-Chr120915 1 3505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120915g00001 6 437 Monolignol Biosynthesis Gene Families AT2G40890 81.062 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120915g00001 K09754 - jre:109008126 788.875