Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120914g00009 ATGGAGAAGGATAATCATATGGGTGTGAAGAGTGAGGAAGCTGATGCTGTTTCTTTTGGATCTTCAAACGGTTATTATAATATTAATCCCTTGTTATTGTCTTCATCGAGTGCGTTTGATTTCTGCCAAGTGGAGAAAAGCGAGTTAGGGTTTATGGAGTTGCTGGGAGTGCAGGACTACTGTAACAGCGGTGGTGCTGCTCTGCTTGATTTGCCACACTTTTCAAAACCTACGGTGGTTAAGGCTTCTTGTGACGGTGATAGTGGTAAAGAGTGTTCTGAGGTGTTGAACCACCAGCATCAGCAACCTGCAACTCCGAATTCGTCTTCGATTTCGTTGGCGTCCAGCGAAGCTGTCAACGATGAACACAATAAATCTGTAGAACAAGGAGTTCATGATGACGATGACGACTACCAAGAAGAACAACAGCAGAAAAAGACTAAGAAACAGTTGAAGGTGAAGAAGACAAAGCAGAAGAGACAGAGAGAGGCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGACGGTTACAGATGGAGAAAGTACGGTCAAAAGGCTGTGAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACGAGTGCTTCATGTAATGTAAAGAAGCGTGTGGAGAGGTCATTTACTGATCCAAGCGTTGTGGTGACTACCTATGAAGGCCAACACACACATCCGAGCCCAGTTATGCCTCGTTCACCCATCGCCGGATCTCTGTTGACGCCGCCGCCGCAAGGTGTCTCCAGCACCAACTTCGCTTCTCTCATGCCTGGAAACTACTTGTCATCGCAATATCATCACCATCACCAACAACAACTGCTAGCGAATACATTGACTTCCTTTGGCTTCCCTTACAAGAATACCAACAATAATAATATTAATAACGCTTCTTTTTCTCAAGACAATGGTCTTCTTCAAGATATTCTTCCTTCAAACATGTTGAAGGAGTACTAG 981 0.4475 MEKDNHMGVKSEEADAVSFGSSNGYYNINPLLLSSSSAFDFCQVEKSELGFMELLGVQDYCNSGGAALLDLPHFSKPTVVKASCDGDSGKECSEVLNHQHQQPATPNSSSISLASSEAVNDEHNKSVEQGVHDDDDDYQEEQQQKKTKKQLKVKKTKQKRQREARFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSPIAGSLLTPPPQGVSSTNFASLMPGNYLSSQYHHHHQQQLLANTLTSFGFPYKNTNNNNINNASFSQDNGLLQDILPSNMLKEY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120914g00009 326 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc120914g00009 326 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 281 IPR044810 GO:0003700
Stsc120914g00009 326 PIRSF WRKY_txn_fact_IIc 1 326 IPR017396 GO:0003700
Stsc120914g00009 326 MobiDBLite consensus disorder prediction 97 158 - -
Stsc120914g00009 326 Gene3D WRKY domain 160 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc120914g00009 326 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc120914g00009 326 MobiDBLite consensus disorder prediction 97 120 - -
Stsc120914g00009 326 FunFam WRKY transcription factor 57 163 237 - -
Stsc120914g00009 326 Pfam WRKY DNA -binding domain 178 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc120914g00009 326 SUPERFAMILY WRKY DNA-binding domain 169 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc120914g00009 326 MobiDBLite consensus disorder prediction 121 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120914g00009 Stsc-Chr120914 81633 84307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120914g00009 34 325 WRKY Transcription Factor Family AT2G47260 46.012 6.21e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc120914g00009 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120914g00009 - - gmx:732591 323.553