Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120913g00010 ATGAATTCTGTGAATTTGGATTGCCTCACACCAGTCGATCATCTTTCTGAAGATCATGAGCAGATGCCAGATCATAGTCACATATCAGAGGATGAAATCCCTAGAACTGGCATGTGTTTTGATTCTTTGGAGGAAGCTCATGATTTTTACAAGAATTATGCGGAGAAAGTGGGATTTGTTATCAAGATTAGGAATACAAATCATGTTAAGAATGCTAAGGGTGAGAAGATTCCAATTAATCAGTCAATCCATTGTAATCGAGAGGGTAATCGCATGTCACGAGCGAAGGCACCAAGAAGATCGAAGAAGATCACGACTGCCATGTGCAATGCAAGGGTGTATGTCAAGTTTAACAAAGACAATACTAAATGGTTTTACTCAATAGTTGAAGGAAAGCACTAG 402 0.3905 MNSVNLDCLTPVDHLSEDHEQMPDHSHISEDEIPRTGMCFDSLEEAHDFYKNYAEKVGFVIKIRNTNHVKNAKGEKIPINQSIHCNREGNRMSRAKAPRRSKKITTAMCNARVYVKFNKDNTKWFYSIVEGKH 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120913g00010 133 Pfam FAR1 DNA-binding domain 48 133 IPR004330 -
Stsc120913g00010 133 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120913g00010 Stsc-Chr120913 61442 62227 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc120913g00010 FAR1 6.5e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120913g00010 - - ahf:112772717 130.183