Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120913g00002 ATGGCTAGCTTTGAAAAAGATGAGGAGCCAACGCTGTTAGGAACACATGTACCACGATCTGATGAACCTGTGGATTCTAATTTCCGGAGGTTTGTGACAAGGACACGAAGTGCGTCAATGTCGATTCCCATGGCCTCTATGGAATCGTCCGACAGAGAAGCTACTTTTGTGGGGCATACTGGTCCACTACTGTCTGTGAGAAAAACCCCTTTTCCACATATGAGTGGTCCACTATATCCCACCCAAGGAACTGGATATCCTTCGCAGTGTAGTAGTGTTGCGACCGGAAACAAAGTAGGGGAGAGCAGGACAGAAAAGTTCCACAACACTGTTGAAAGTCATTGGAATAACAACAATGATAGGAAGAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTTAAGGCTGCCCAACAAGGAAATTCAAGAACTTCGTATAGAATTGATCCCATGTTCCATAATGTTCTGTATGGAGATGCCAAGGGTTTCGCTAGAAAAGTTTACTCTTTTTGCTCTTCACATGTTCCTGGAGTTATGAACCCTCACACTAAAGTTGTGCAACAATGGAACAAGGCTTTGGCTATTTCTTGTTTGTTTGCAATTTTTCTAGATCCATTATTTTTCTTCTTGCTGAATGTGCAGCAGGATTTGAAATGTATTTTTATCAACTGGACAATGACAGCTACACTTGTTTTACTTAGAAGCTTGAACGATGCCGTTTATTTCTTGAACATTCTTCTTCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAACAGTGGTTGGTGCCGGAGATTTAGTTGACCACCCAAAGAAAATTGCTTTACATTACCTATGGGGCTATTTTTTCCTTGATTTATTTATTGTGATTCCCCTTCCTCAGATAATGCTTTATTTCATTGTACCAAACTACTTGGGTTTCTCAGGAGCAAATTATGCTAAGAATCTTCTGCGTACAGCTGTGCTTGTGCAATACATCCCGAGACTATTTAGGTTTCTGCCTTTGCTAATTGGCCAGTCTCCAACTGGATTCATATTTGAGTCGGCATGGGGGAATTTTATTATAAATCTTCTTATTTTTATGCTATCTGGACATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGCTTTCGAAACGCCTGCTCTAATTCTACTATTTCCACTCGCACTTGCATGAATTACATTGACTGTGGCCTGTCCACCAACACACCAGCTGTGTGGCATACTAATGAAAATGCCACTAATTGTCTGAATCCCGCTTCTGGCGTTTTTGAATATGGGATTTATGCCAATGCTGTACAACTTACCACTGAAACTAGTGTGGTCAAGAAATATGTGTATTCCCTGTTTTGGGGTTTCCAGCAAATAAGTACCCTCGCTGGTAATCAAACCCCAAGCTACTTTGTGTGGGAAGTCCTGTTCACAATGGCCATCATAGGACTAGGACTCTTGCTTTTCGCACTTCTTATTGGAAACATACAAAATTTTCTTCAAGCTCTAGGGCGAAGGAGATTAGAAATGCAACTTAGAGGACGAGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTAAGAAGGAGAGTAAGACAAGCGGAACGATATAATTGGGCTGCAACAAGAGGGGTAAATGAAGAAATGCTTCTAGAAAATATGCCTGAAGATCTCCAAAGAGACATAAGGCGCCATCTGTTCAAATTTATCAAGAAAGTTTCTCTACTTGCATCCTGCTGGAATTAG 1803 0.4132 MASFEKDEEPTLLGTHVPRSDEPVDSNFRRFVTRTRSASMSIPMASMESSDREATFVGHTGPLLSVRKTPFPHMSGPLYPTQGTGYPSQCSSVATGNKVGESRTEKFHNTVESHWNNNNDRKNEHLLRSGQLGMCNDPYCTTCPTYFKAAQQGNSRTSYRIDPMFHNVLYGDAKGFARKVYSFCSSHVPGVMNPHTKVVQQWNKALAISCLFAIFLDPLFFFLLNVQQDLKCIFINWTMTATLVLLRSLNDAVYFLNILLQFRLAYVSPESTVVGAGDLVDHPKKIALHYLWGYFFLDLFIVIPLPQIMLYFIVPNYLGFSGANYAKNLLRTAVLVQYIPRLFRFLPLLIGQSPTGFIFESAWGNFIINLLIFMLSGHVVGSCWYLFGLQRVNQCFRNACSNSTISTRTCMNYIDCGLSTNTPAVWHTNENATNCLNPASGVFEYGIYANAVQLTTETSVVKKYVYSLFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYNWAATRGVNEEMLLENMPEDLQRDIRRHLFKFIKKVSLLASCWN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120913g00002 600 MobiDBLite consensus disorder prediction 1 15 - -
Stsc120913g00002 600 Gene3D - 202 519 - -
Stsc120913g00002 600 SUPERFAMILY cAMP-binding domain-like 522 596 IPR018490 -
Stsc120913g00002 600 Pfam Ion transport protein 206 522 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Stsc120913g00002 600 SUPERFAMILY Voltage-gated potassium channels 194 522 - -
Stsc120913g00002 600 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 135 596 - -
Stsc120913g00002 600 Gene3D Helix hairpin bin 521 586 - -
Stsc120913g00002 600 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120913g00002 Stsc-Chr120913 10565 17423 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120913g00002 1 596 Ion Channels AT3G17700 60.461 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120913g00002 K05391 - ccaj:109789004 891.723