Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120912g00011 ATGGAAGGCATTATCAAATGGGAAAATGATGTGGTTGGAGCTACAAAAGGGAACGAGCCAAAAACTTACAAAAATGGTGACCTTAATTCTTCTTATGCCCAATTTTCCAAGGCTGCTAGTAGTAGCTATCTAGCTCCTAATAAGAATGTTTGCAATAATCCTTCTGATATGAGGAACCCTGGCAATGGTTCAGATGATCAGCTACTCCATTTTGCTGAATTCATTTTAGGACCTAAGTTTGATCCAAACATGGATCCTAAGAAAATCAACAAAATGATATCAAATCGGCTCTCTGCACAGAGATCCAGATATAGAAAAATGCGATATCTACTCAATTTAGAAGAACAAGCTAAAACTTTTGAGGAGAAAGTAACAGCTCTCCGTACAGAAATTACATCCTACACAAATCAGAAACAGCTTTTGATGTCGGAGCAAGCGACGTTGCGCCAGAAATTGGAAGCTATTGAGAAAGAAAAATCACTTAGGAATGCTGAAACCGAAAAGAGGAATGCGGAATTGAAGATTCTGAAGGAACTCAAAATGAAGAAGGAGTTGGAAGAACTATTTGGAGTACCAATTTTCAATCATGATGATGCTATTATTCCACATCCACTGGTATCTTGTTATACCAACTCAGGTCAAGTTGCAGAGAAGAATAATGGTGACGAAACTTCATCGGAAATAATGAAGGTGGAAATGGCACCAATAGATCATGAACAGCAAGTGGTGTTACAGGGTAATAATATGGATTTGCTAGCACCCAACAACATGACCCTGCCCAGTTATCCGGGAAGCAAAAACTAA 804 0.3868 MEGIIKWENDVVGATKGNEPKTYKNGDLNSSYAQFSKAASSSYLAPNKNVCNNPSDMRNPGNGSDDQLLHFAEFILGPKFDPNMDPKKINKMISNRLSAQRSRYRKMRYLLNLEEQAKTFEEKVTALRTEITSYTNQKQLLMSEQATLRQKLEAIEKEKSLRNAETEKRNAELKILKELKMKKELEELFGVPIFNHDDAIIPHPLVSCYTNSGQVAEKNNGDETSSEIMKVEMAPIDHEQQVVLQGNNMDLLAPNNMTLPSYPGSKN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120912g00011 267 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 105 IPR004827 GO:0003700|GO:0006355
Stsc120912g00011 267 Pfam bZIP transcription factor 87 142 IPR004827 GO:0003700|GO:0006355
Stsc120912g00011 267 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 148 IPR004827 GO:0003700|GO:0006355
Stsc120912g00011 267 SMART brlzneu 83 147 IPR004827 GO:0003700|GO:0006355
Stsc120912g00011 267 Gene3D - 89 145 - -
Stsc120912g00011 267 SUPERFAMILY Leucine zipper domain 87 142 IPR046347 GO:0003700|GO:0006355
Stsc120912g00011 267 Coils Coil 110 188 - -
Stsc120912g00011 267 CDD bZIP_plant_RF2 88 139 IPR044759 GO:0003700|GO:0006355
Stsc120912g00011 267 PANTHER BASIC LEUCINE ZIPPER 34 67 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120912g00011 Stsc-Chr120912 61206 63989 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120912g00011 85 177 bZIP Transcription Factor Family AT2G21230 35.484 3.42e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc120912g00011 bZIP_1 4.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120912g00011 - - adu:107458287 293.508