Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120912g00007 ATGAGTAATACAAAGAGACACATAGGTAGGGATGATGAGAAGGTAGTAGAGCAACCATGGCCAAAGAGACCTACTCTAATTAAACCTCTGCCATTAAGGAATTCAGCTAATAAAGCTCCTTTATGTTTTGGTTCATCATTTAAACCTTGGAGAAAGCCCTCCCATGATGAGAACATTAATAATGGTAGTGACAAAAACTACATGGCCAACACTATTAATAATAATGAAGTCCAAGTTATTGGTTCTATTAGCAACAACACCAATCAAGAAATGGATCCAAAGAGGCTCAGAAGGATAATGTCAAATCGAATTTCTGCACAAAAAGCAAGAGAAAAGAGTAATGCATATGTGGCAGATTTGGAAAACAAATCGAAAGCTTACGAGGAACAGATAGCTCTTATTCTTCCACAAATTGAATCCCAACAAACTAGACTCAGCTCATTGAGAATGGAGCAGCATAAATTGAAACTACTCATGGCTACTTGTGAAAAAGAAAGATTAATTCAAGAAGAAGTTGAGAGGCTCAGAGCACTGCAATTGAAATTAGCAGCCGAAGCAGAGCAAGCATGGTTGGTGTTCCCTTCAACTTCAGGCTTTGGGCCATTCATTACCAACAACTCAATTCAAGGTTAG 633 0.3823 MSNTKRHIGRDDEKVVEQPWPKRPTLIKPLPLRNSANKAPLCFGSSFKPWRKPSHDENINNGSDKNYMANTINNNEVQVIGSISNNTNQEMDPKRLRRIMSNRISAQKAREKSNAYVADLENKSKAYEEQIALILPQIESQQTRLSSLRMEQHKLKLLMATCEKERLIQEEVERLRALQLKLAAEAEQAWLVFPSTSGFGPFITNNSIQG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120912g00007 210 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 97 112 IPR004827 GO:0003700|GO:0006355
Stsc120912g00007 210 Coils Coil 150 188 - -
Stsc120912g00007 210 SUPERFAMILY Leucine zipper domain 94 149 IPR046347 GO:0003700|GO:0006355
Stsc120912g00007 210 Gene3D - 94 160 - -
Stsc120912g00007 210 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Stsc120912g00007 210 Coils Coil 110 130 - -
Stsc120912g00007 210 PANTHER BASIC LEUCINE ZIPPER 34 77 178 - -
Stsc120912g00007 210 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
Stsc120912g00007 210 Pfam bZIP transcription factor 94 151 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120912g00007 Stsc-Chr120912 42910 44389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120912g00007 91 205 bZIP Transcription Factor Family AT2G31370 29.565 8.84e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc120912g00007 bZIP_1 9.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120912g00007 - - adu:107458286 270.781