Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120912g00003 ATGGATTCAAATTCTCAAGAAGCTGTGCAAGTGAATTCAGGTTCACAAATGGATGTAGATTCACAAGAACAAGAAGACATGCAAGTGGATTCAGAAGAAGCAGTTCAACAAGCTGATTCAGAATCACAAGAGGCGAAAACAGATATTTCTCTGATCATGCCAAAACTCACTGCTTATATGGAAGTGATTAGGACTAATAACTCCACGGTGATCAACAAGATTCGCAACTACTTGTTATACATTCGAGCAGAAGAAATCGATGCCTCCAACTTGGTGATCAATGCAATTCATCCAGACATGATTGACAACCTCCAAGAAGCAGTTAAGCTCATGATCGATGCAGGCTTCGACAAAGAATGTTGCAATGAGTACAGCAAATTTCGCATGGCGTGTATCACAAGTTGCCTGTCATATCTAAAAGGATTGCAGCCGAACCTTGAATCTCGGGAAATTGCTAAGAAGGGAACAAAGTTTTTTGATCATGAGATTAGGGAATGGACTAAAGTTTCAAATGTAATTGTGCGGGTTTTGCTTCCAAGTGAAAGAACACTCTGCGAGCGAGTTTTCTTGGGCTACACAGAAACTATGAATCTTGCTCTAATGGAAGTTTGTAGGCCATTCGTGATTCGCGTACTAGATTCTGCTGTTAATCAAGCAGTTGAACTCGCTCACTCCAATAAAATTGAATTGTTTTCTATGATCTCAAGAGTGATCAAAGCATTTCATGACTTGATTCAGGAGATTGAGTGGCTGTTTCCTGGCCCGGGGCCACTTGGAGATTATTCAATAAGAAATGAATACATCAACACTAGAAAGAGGTTGCGGAAAGCAACTATGGACATTCTTGAGAGGCTAGAAGATTGGATTTGCAATGAGAATGAGATGACATGTTTTTATGGCGGGCTCTATCCGATAATCTCTTGGGATGTGATGAACTGCCTCGGGGAAATTTGCGAAGCTTGGACAGCCATCAGCTTTTCAATGGTTGCTGATGAAGAAGGAACTGCTCCTTGTTCTTCATTCTCAGATCAGTTTAATAGGATAATAGAGATGTTAAATAGTCATGTGGAAATTGAGTCTAAGAAATATACTGATCCTGCTGAGGGCTGTATTTTCATGATGAATAGTCAGAGGTATATACAACAGAAGATAATAGAGTTTCAATCGAAAATGAGCACGATTTTGCCGACGCTGAATGGCGCCATCGATGAAAATAATGCCATGGTAAGACAGAATCTTGAAGATTATCGAAGAAGCTCGTGGGTTGAGGTTATTGGGCTTTTGAAGCATCGCGGCGGAGATGAGCCGAATGCAGTGGAATCTATGAAGGAGAGTCTCAAATTGTTCAATGTGAAGTTGAAGGAAATATGCAGGGTTCAGTCTACATGGTTTGTCCTTGATGAAGAGCTAAGAAAGGAAATAAGAGAGTCCATAGAGGAAATCTTGTTGCCAAACTATGGAATCTTCATTGGTAAGTTGCAGAACTTTCTTGGTTCTGATGCTGATAAGTACGTTGAGTATTCATTGTATGACATTGATGCTCTACTCAATGATTTGTTTCGTGGAGGCAATTGA 1575 0.4032 MDSNSQEAVQVNSGSQMDVDSQEQEDMQVDSEEAVQQADSESQEAKTDISLIMPKLTAYMEVIRTNNSTVINKIRNYLLYIRAEEIDASNLVINAIHPDMIDNLQEAVKLMIDAGFDKECCNEYSKFRMACITSCLSYLKGLQPNLESREIAKKGTKFFDHEIREWTKVSNVIVRVLLPSERTLCERVFLGYTETMNLALMEVCRPFVIRVLDSAVNQAVELAHSNKIELFSMISRVIKAFHDLIQEIEWLFPGPGPLGDYSIRNEYINTRKRLRKATMDILERLEDWICNENEMTCFYGGLYPIISWDVMNCLGEICEAWTAISFSMVADEEGTAPCSSFSDQFNRIIEMLNSHVEIESKKYTDPAEGCIFMMNSQRYIQQKIIEFQSKMSTILPTLNGAIDENNAMVRQNLEDYRRSSWVEVIGLLKHRGGDEPNAVESMKESLKLFNVKLKEICRVQSTWFVLDEELRKEIRESIEEILLPNYGIFIGKLQNFLGSDADKYVEYSLYDIDALLNDLFRGGN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120912g00003 524 Gene3D Exocyst complex component Exo70 15 524 - -
Stsc120912g00003 524 PANTHER EXOCYST COMPLEX PROTEIN EXO70 33 522 IPR004140 GO:0000145|GO:0006887
Stsc120912g00003 524 SUPERFAMILY Cullin repeat-like 76 520 IPR016159 -
Stsc120912g00003 524 MobiDBLite consensus disorder prediction 1 22 - -
Stsc120912g00003 524 MobiDBLite consensus disorder prediction 1 46 - -
Stsc120912g00003 524 Pfam Exo70 exocyst complex subunit 165 518 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120912g00003 Stsc-Chr120912 14961 17312 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120912g00003 83 522 EXO70 exocyst subunit family AT5G58430 35.938 3.86e-76 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120912g00003 - K07195 adu:107458298 815.453