Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120912g00001 ATGGCAGGGTTGCTCACTGAAATCCAGAGATGTATGAGGCAAGCACATTGTCCTCATTTGTTTCTTGATTTTATCTGCAAAGCGATGGCAATGCTCAACCACTTTGCGATTCAAAGCTCATCTGTCTTTTTTGACTTTGACAATAACTCCGTCTATTCCTTTTTCTTGGATAAAGATGTCAACGGAAAACCAGATGTTTACAGCCTAATTTCTTGTGCTTCCTTTGCTGTTATGTCTCTTTGCTTGTCGAAGCAGATACACTTTGGATTTGAAGTGGATCTATTGTACTTCTTCTTGGGAGCTTTGATAGTACAGCTCATGAAGATACATTTGTTTTTAGGTATCTTTGGAGTGGGATTCAGCTACTTCCTCATCATTCTCCGTTCCTCTCTAGATTCAGAGAATGAGCACCATAGATTGAATGATCAGTATCACTCAGTTGTGCAAGTTGATTCAGATTCACAGCAACAATTCACCTCTTGCATAGAGGCTCTTAAGTCATGTGATTGGGAGCTAATTAATACGCTTTCCAATTATGCAAAAGATTACATCAAGAACCTCCTTGAATCCAACTATCAGGACCATGTCCCCGTTGACACCAACCAGGTGATTGATGCGTTGCCGGTAAACATTATCAATGACCTTCAAGAAGCAGTGAAGGTCATGCTGGCTAATGGATTTGTGAAAGAGTGCTGCGAGTGGTACAGCAGTTGCCGAAGTGAATACATAGAAAATTTCGTATCCAATTTAAAGTTGAAACTGCTGGATACTGTACTTGTTGCTGAGGTGGAACCAATTGCTCTTGAATTTGAAGTTCGGAATTGGATAAGCACTTCCAATTTAGCTTTGAAGTTTCTGTTTCCCAATGAAAGAAGACTATGCGAGCGTATCTTCTCGGGGTTCACCACGGTTTGGGATACCGTATTCACTGAAATTTGCAGGGAATTCGTGATACGTCAATTGAATTTTGCAGAATGTTTTACATTTGAGAGCTCTGACTTGAAGACATTTGAAGTCTTCCCCATGAGCGTAAAAGTATTCAAGGCACTGGATGACTTGATTCCAGAGTATGAATCATTGTTTTCCGAACAATCCTGTGATTTAATTAGAAATGAAGCTATCAACACTTGGAAGAGACTGGGGAAATCAACCAAAGGGATTTTCATGGAGTTGGAGGATTGGATTTGCAATGATAAAGCCATATCAGATGTTCCTGGGGGACTTTATTCAATCTGCAGCAAAGTGATAGAGTGCCTTAATGCTGTTTATAAAGCTTGGGTCATCCTTCCCCTTGAGAATTTTTTCCAAGAGCATCCAATGGTTGTTTACACAGAGGAAACCCCTTCTTCATTCTTTATCCAGTTGATTAGGATAACAGAACTTCTAGAGAGGCATTTGCAAGTCAAGTTTGAAAGCTGCCCGGATGGTGCTATGCGCTACGTTCTAGCAATGAATAATGTAAGGCACATTGAACAGAATGCAAGGAAATGGAATTCGGAAACAAGCCCTATGTATAATAATGACGTGATTAGAAAACTGAATGCAAAATTCAGACAAAACCTTCAAGACTATCTGAGAGTCTCATGGGATGAGGTTATTGGGCTTTTGAAGCTGGGCAATAATGAACCATATTCTGTGGAATCTATGAAAGAAAATCTCAAATTTTTCAACTTGCACTTTAAGGAAATATGCAGAGTTCAGTCTACATGGTTTGTCCTGGATGAGAGACTAAGAAAAGAAATAAGAGAGTCCATAGATAATATGTTGTTGCCAATATATGGAGTCTTTATTGGAAAGTTGTATAATGTTCTTGGTTCACATGCCAATGAGTATATTGATTACTCAATGCTTGACATAGATGCTCTGCTCAATGATTTGTTTCGAGCATAA 1890 0.3921 MAGLLTEIQRCMRQAHCPHLFLDFICKAMAMLNHFAIQSSSVFFDFDNNSVYSFFLDKDVNGKPDVYSLISCASFAVMSLCLSKQIHFGFEVDLLYFFLGALIVQLMKIHLFLGIFGVGFSYFLIILRSSLDSENEHHRLNDQYHSVVQVDSDSQQQFTSCIEALKSCDWELINTLSNYAKDYIKNLLESNYQDHVPVDTNQVIDALPVNIINDLQEAVKVMLANGFVKECCEWYSSCRSEYIENFVSNLKLKLLDTVLVAEVEPIALEFEVRNWISTSNLALKFLFPNERRLCERIFSGFTTVWDTVFTEICREFVIRQLNFAECFTFESSDLKTFEVFPMSVKVFKALDDLIPEYESLFSEQSCDLIRNEAINTWKRLGKSTKGIFMELEDWICNDKAISDVPGGLYSICSKVIECLNAVYKAWVILPLENFFQEHPMVVYTEETPSSFFIQLIRITELLERHLQVKFESCPDGAMRYVLAMNNVRHIEQNARKWNSETSPMYNNDVIRKLNAKFRQNLQDYLRVSWDEVIGLLKLGNNEPYSVESMKENLKFFNLHFKEICRVQSTWFVLDERLRKEIRESIDNMLLPIYGVFIGKLYNVLGSHANEYIDYSMLDIDALLNDLFRA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120912g00001 629 Pfam Exo70 exocyst complex subunit 273 625 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc120912g00001 629 SUPERFAMILY Cullin repeat-like 174 627 IPR016159 -
Stsc120912g00001 629 Gene3D Exocyst complex component Exo70 129 629 - -
Stsc120912g00001 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 142 627 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120912g00001 Stsc-Chr120912 3079 5093 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120912g00001 195 629 EXO70 exocyst subunit family AT5G58430 41.834 1.30e-100 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120912g00001 - K07195 aip:107607007 905.975