Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120911g00013 ATGAAGAAAATATCAAGCCATGCATCATCAAACAAGGTGATAAATTTAAATGAAATGGTAATTTCTCTAACGAGCACTATTATTTGTAGAATTGCCTTTGGAAAACGGTATGAAGATGATGGAGGTGAAAGGAGTAAGTTCCATGATTTGTTCAATGAATGTCAAGCTATGTTGGCTAGCTTCTTTGTTTCGGATTATGTTCCTTTCTTGGGTTGGATTGATAGACTCAATGGAATGCATGCACGTCTTGATAGAACTTTCAAGAAGTTGGATAAGTTCTATGAAGAAGTGATTGATGAACATATGGATCCTAATAGAGACACTTCTAATGGAGAGGATATCATTGATGTCTTGCTTCAATTGAAGAAGAACCGTTCATGCTCATTTGACCTCACTATTGATCACATCAAAGCGCTCTTTGTGGACACACTTGTAGCGGCGACGGACACAACTGCCGCCACAATAGTGTGGGCTATGACCGCACTAATAAAAAATCCAAGAGTGATGAAGAAAGTTCAAAGAGAAATTAGAAGTTTTGGAGGTGAAAAAGATTTCCTAGAAGAAGAAGATATTCAAAAGTGTAGCTATTTAAAACTTGTGATAAAAGAAACTTTAAGATTGCATTTACCAGCACCACTACTTGTGCAAAAAGAGACAAACAAAACGTGCATTATAGATGGCTATGAGATTCCAAATAAAACTATTGTGTATGTGAATGCTTGGGCTATTCATAGAGATCCGGAAGCTTGGAAAGACCCACATGAATTTTGTCCCGAGAGATTCTTAGACAGTGATATAGATTTTTTTGGACAAAATTTCGAGTTTATTCCGTTTGGTGCTGGTAGAAGAATTTGTCCAGGTATGCATATGGCACTTGCTTCACTTGACCTTACTCTTGCTAATCTTCTTTACTCCTTTAATTGGAAACTTCCAGAAGGGATGAAGAAAGAAGATATTGATACTCAAGTGTTGCCTGGATTAACACAACATAAGAAGAATTCTCTTTACCTTGTTGCCAAAAATTATAACAAGGGTTGTTAA 1041 0.365 MKKISSHASSNKVINLNEMVISLTSTIICRIAFGKRYEDDGGERSKFHDLFNECQAMLASFFVSDYVPFLGWIDRLNGMHARLDRTFKKLDKFYEEVIDEHMDPNRDTSNGEDIIDVLLQLKKNRSCSFDLTIDHIKALFVDTLVAATDTTAATIVWAMTALIKNPRVMKKVQREIRSFGGEKDFLEEEDIQKCSYLKLVIKETLRLHLPAPLLVQKETNKTCIIDGYEIPNKTIVYVNAWAIHRDPEAWKDPHEFCPERFLDSDIDFFGQNFEFIPFGAGRRICPGMHMALASLDLTLANLLYSFNWKLPEGMKKEDIDTQVLPGLTQHKKNSLYLVAKNYNKGC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120911g00013 346 CDD CYP71-like 1 335 - -
Stsc120911g00013 346 Gene3D Cytochrome P450 1 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS E-class P450 group I signature 285 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS E-class P450 group I signature 155 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS E-class P450 group I signature 23 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS E-class P450 group I signature 239 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS E-class P450 group I signature 135 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS E-class P450 group I signature 275 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS P450 superfamily signature 276 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS P450 superfamily signature 199 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS P450 superfamily signature 146 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 Pfam Cytochrome P450 2 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 PANTHER CYTOCHROME P450 71B11-RELATED 5 340 - -
Stsc120911g00013 346 SUPERFAMILY Cytochrome P450 4 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00013 346 Coils Coil 169 189 - -
Stsc120911g00013 346 FunFam Predicted protein 144 337 - -
Stsc120911g00013 346 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 278 287 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120911g00013 Stsc-Chr120911 115728 117262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120911g00013 1 342 Cytochrome P450 AT4G31500 47.246 5.13e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120911g00013 - - gmx:100801312 525.783