Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120911g00007 ATGGGGTCAGAGATGATTTTTTCTCCATACAATGAGTTTTGGAGAGAAATTAGAAAAACATGTGTAGCTCATGTTCTTAGCTCTAACCGTGTATCAAGCTTTTCTTCGATAAGAACATTTGAGGTCAAGCAGTTGATCAAGAAAATATCAAGCAATGCTTCATCAAGAAAGGTGATGAATTTGAATGAAATGATGATGTCTCTAACAAGCACTATTATTTGTAGGGTCGCCTTTGGAAGAAGTTATGAAGATGAAGGCGGAGTAGAAAAGAGTAAGTTCCATGATCTGCTCAATGAATGTCAAGCAATGATGGGTAGCTTCTTTGTTTCGGATTATATTCCTTTCTTGTGGTGTATTGATAGACTCAATGGAATGCATAAACGTCTTGATAGAATTTTCAAGGAGTTGGATGAGTTCTGTCAACAAGTGCTTGATGAACACATGGATCCAAATAGAAACACTACTACATCACCAAGAGAGGATATTGTTGATGTCTTGCTTCAGTCGAAGAAACAACAAGCATTTCCCTTTGACCTCACTTATGATTGCATCAAAGCAGTAATAATGGATATGATTGTAGGAGCAACAGGTACATCTACAGCCACAATAGTGTGGGGTATGATCGAGCTCATGAAAAATCCAAGAGTAAAGAAGAAAGTTCAAGAAGAAATTAGGAATTTTAGAGGTCAAAAAGATTTCTTAGATGAAGAAGATATTCAAAAGTGTAGCTATTTTAAGGCTATGATAAAAGAAACACTAAGATTATATCTACCAGCACCATTACTTGTACCAAAAGAAACGAATGAAAAATGCATTATAGATGGCTATGAAATTCCTGCGAAGACTATAGTTTATATAAATGCCTGGGCTATTCATAGAGACTCTGAAGTTTGGAAAAATCCACTAGAGTTTTATCCTGAGAGATTCTTAGAAGATAGTTCAATTGATGTTAAGGGTCAAAATTTCGAGCTAATTCCATTTGGTGCAGGTCGTAGAATTTGTCCAGGTATGCATATGGCACTTATAGCACTTGACCTTATTCTTGCTAATCTTCTTTATTCCTTTGATTGGGAACTTCCAGAAGGAGTAAATAATGAAGATGTAGATGTTGAAGCTTTGCCCGGGTTAATTTCGCATAAGAAGAATCATCTTTACCTTATTGCCAAAACTAGGAAAGAATAA 1182 0.357 MGSEMIFSPYNEFWREIRKTCVAHVLSSNRVSSFSSIRTFEVKQLIKKISSNASSRKVMNLNEMMMSLTSTIICRVAFGRSYEDEGGVEKSKFHDLLNECQAMMGSFFVSDYIPFLWCIDRLNGMHKRLDRIFKELDEFCQQVLDEHMDPNRNTTTSPREDIVDVLLQSKKQQAFPFDLTYDCIKAVIMDMIVGATGTSTATIVWGMIELMKNPRVKKKVQEEIRNFRGQKDFLDEEDIQKCSYFKAMIKETLRLYLPAPLLVPKETNEKCIIDGYEIPAKTIVYINAWAIHRDSEVWKNPLEFYPERFLEDSSIDVKGQNFELIPFGAGRRICPGMHMALIALDLILANLLYSFDWELPEGVNNEDVDVEALPGLISHKKNHLYLIAKTRKE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120911g00007 393 Gene3D Cytochrome P450 1 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS P450 superfamily signature 247 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS P450 superfamily signature 325 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS P450 superfamily signature 194 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 327 336 IPR017972 GO:0005506|GO:0016705
Stsc120911g00007 393 PRINTS E-class P450 group I signature 183 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS E-class P450 group I signature 68 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS E-class P450 group I signature 334 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS E-class P450 group I signature 246 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS E-class P450 group I signature 324 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS E-class P450 group I signature 287 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PRINTS E-class P450 group I signature 203 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 FunFam Predicted protein 192 386 - -
Stsc120911g00007 393 SUPERFAMILY Cytochrome P450 2 391 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 Pfam Cytochrome P450 3 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00007 393 PANTHER CYTOCHROME P450 71B11-RELATED 3 389 - -
Stsc120911g00007 393 Coils Coil 217 237 - -
Stsc120911g00007 393 CDD CYP71-like 2 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120911g00007 Stsc-Chr120911 75857 77422 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120911g00007 2 386 Cytochrome P450 AT4G31500 44.186 3.24e-124 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120911g00007 - - gmx:100801312 556.599