Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120911g00005 ATGAAGGAGATGAAAGGAGATATGCTTGTTGCAGCAACTGATACAACTGCAGCCACAATAGTTTGGGCTATGACTGCACTTATGAAGAATCCAAGAGTGATGAAAAAAGTTCAAGAAGAAGTTAGAAATTTTGGGGATAAAAAAGATTTCTTAGATGAAGATGATATCAATAGATGTCGCAGAATTTGCCCAGGTATGCATATGGCAGTTGTAGCACTTGATCTTCTCCTTGCTAATTTTCTTTATTCCTTTGATTGGGATCTTCCAGAAGAAGTTAAAAGTGAAGATGTTGATGTTGAAGCTTTGCCGGGGTTGGTTTCACATAAGAAGAATCATCTTTTCCTTATTGCCAAAACTAGGTAG 363 0.3719 MKEMKGDMLVAATDTTAATIVWAMTALMKNPRVMKKVQEEVRNFGDKKDFLDEDDINRCRRICPGMHMAVVALDLLLANFLYSFDWDLPEEVKSEDVDVEALPGLVSHKKNHLFLIAKTR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120911g00005 120 Gene3D Cytochrome P450 1 59 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00005 120 SUPERFAMILY Cytochrome P450 6 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00005 120 Gene3D Cytochrome P450 60 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00005 120 Pfam Cytochrome P450 6 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00005 120 Pfam Cytochrome P450 60 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00005 120 Coils Coil 34 54 - -
Stsc120911g00005 120 PANTHER TRYPTAMINE 5-HYDROXYLASE 59 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120911g00005 Stsc-Chr120911 63695 65929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120911g00005 1 56 Cytochrome P450 AT4G31500 50.000 1.26e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120911g00005 - - bvg:104894310 98.5969