Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120911g00004 ATGGCCCAAGAAGTGTTGAAAACTCATGACCTTGAGTTTTGTGGAAGGCCTTCTTTTCTTGCCCAAAAGAAAATTTCCTACAATAGGGTTGCAATTGCATTCTCACCATGCAATGATTCATGGAAAGCAATCAAGAAAATTTGTGTGACCCATTTCCTTAGTTCAAGTAATGTCTCAAGATTCTCCTCTATACGCCAATTTGAGGTGAATCAAATGATCAAGGAGATATCAATTCAAGCTTCTAATAATAATAAAAGTGTGACAAATTTGGATGATGCAATTTTGTCACTCACCAATACTATAATTTCTAGAATTGCTTTTGGAAGAAGCTATAAATATGATAAGAGGTTGCTTGGTTTGCTTAATGAATCTCAAGGTTTGTTGGGAGCATTCTTTGTTTCTGATTATGTTCCATTCATGGGGTGGATTGATAAACTTAGAGGTATGCATTCTCTTCTTGAAAGAAATTTCAAGAAATTGGATGCGTTCTTGCAAGAAATTGTCAACCAACACCTTGATCATCCGGAGCGACAAAAATCTGAAGAAGAAGAAGAAGATAATGTCATTGATGTGTTGTTGAAGCTGAAGATTAATAAGGAGCAGTCATTTCCATTTGATCTCACTTATGAACACATCAAGGCTGTGCTAGTGGACATACTTATTGGAGGGACATATTCAAGTGCTGCCACATCAACTTGGGCCATGGCCAAACTACTGAAGAGCCCTAAAACAATGATGAAAGTTCAAGCAGAAGTTAGAAACTTCTTTGGTAGAAAAGGCTTTGTTGATGAAGAAGAAATAAAAAATAATAATGATTTACCTTATCTTAAGGCAGTGATAAAAGAGACACTTAGATTACAGCCACCATTACCACTTCTTTTAACAAGAGAAACAAATGAAGCATGCAAATTAGGAGAATATGAAATTGAAGCCAATACATTAGTGTATGTTAATGCATGGGCAATTCAAAGGGACCCTGAAATTTGGAAAAATCCAGAAGAATTTTATCCCGAGAGATTTTTCGAAAGTTCAATTGATTTTAAGGGTCAAGATTTTGAGTTGACTCCATTTGGCTCTGGAAGGAGAGTTTGCCCTGGGTTGAATATGGGAGTTGCAACTGTGGAGATTATAGTTGCTAATCTTCTTTTTTGGTTTGATTGGGAGGTGCCAATTGGGATGGAAGATTTGGATAATAATGAAATCAAACCCGGAATTGTTCATAGCAAAAAAAATCCTCTGATTCTTAGGGCAAAAAATTATTATCATATTTGA 1272 0.3577 MAQEVLKTHDLEFCGRPSFLAQKKISYNRVAIAFSPCNDSWKAIKKICVTHFLSSSNVSRFSSIRQFEVNQMIKEISIQASNNNKSVTNLDDAILSLTNTIISRIAFGRSYKYDKRLLGLLNESQGLLGAFFVSDYVPFMGWIDKLRGMHSLLERNFKKLDAFLQEIVNQHLDHPERQKSEEEEEDNVIDVLLKLKINKEQSFPFDLTYEHIKAVLVDILIGGTYSSAATSTWAMAKLLKSPKTMMKVQAEVRNFFGRKGFVDEEEIKNNNDLPYLKAVIKETLRLQPPLPLLLTRETNEACKLGEYEIEANTLVYVNAWAIQRDPEIWKNPEEFYPERFFESSIDFKGQDFELTPFGSGRRVCPGLNMGVATVEIIVANLLFWFDWEVPIGMEDLDNNEIKPGIVHSKKNPLILRAKNYYHI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120911g00004 423 PRINTS P450 superfamily signature 278 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS P450 superfamily signature 355 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS P450 superfamily signature 222 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PANTHER CYTOCHROME P450 71B11-RELATED 1 417 - -
Stsc120911g00004 423 CDD CYP71-like 1 413 - -
Stsc120911g00004 423 PRINTS E-class P450 group I signature 1 17 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS E-class P450 group I signature 97 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS E-class P450 group I signature 364 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS E-class P450 group I signature 318 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS E-class P450 group I signature 354 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS E-class P450 group I signature 277 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS E-class P450 group I signature 211 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 PRINTS E-class P450 group I signature 231 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 FunFam Predicted protein 220 415 - -
Stsc120911g00004 423 Gene3D Cytochrome P450 1 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 357 366 IPR017972 GO:0005506|GO:0016705
Stsc120911g00004 423 Pfam Cytochrome P450 1 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120911g00004 423 SUPERFAMILY Cytochrome P450 2 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120911g00004 Stsc-Chr120911 54750 56530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120911g00004 1 415 Cytochrome P450 AT4G31500 43.499 3.26e-117 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120911g00004 - - gmx:100778293 469.929