Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120911g00003 ATGATTCAAGAAGAGGAGAAAAATCTAAAAATTCAAGCAAATTCAGATCCACACACAAATGCAGATCCAGAAGATGAAGAAAAAGACAATCTAGAATTTCAAGCTCACAATCAAACACAAATGCAGAGTCATATTATTCCAGATTTGGCAAATACATCAACCAAATTGCAAACAGAAATTCAGATCTACACAACAGAAGAGGATGAAATAGATGCAGTTTCAAATCAACGACAACAAGATGACTCAACAGAAATTCAAATTTCAGTAATCCAAAGAATTCAATTACAAAGCCAACTCAAACATTCAAACACCAAATCCAGTGTTTCAGAAATTCAAGAAGATGAAGTTGAGTTTGATGAGAAGAGCATTTACTACGGATCTGATGATCAGAGAGCGACAATTGTGGTAGACCGGCCACCTCCAGAACCGCCGGATATGCATTCAGTCGCGGTGGGTGAGAGTGAATCGGGGTTGTCAGTGACCACGGCAGAGGAAAGCTCGCGTAGGCCAGAGAACTTGGAGATGGTGACTGCGATTCACAGCGGCGCCGAGGACGGCGCCGTCGCGAAGGGGAATGTGGTGGACGTCGGCTCGGCAGATCTGAACAGGGGTAGCAGTGCCGTGGTTGGCGCTTTCGCGGAAGGAATGTGGACGGCGACCGGCAGAACAACAGCCGCGACGGTGGTTGATAGAGGTCTCCGGGCTCGGCGGTTGAGGCGGTTTTTCTCTCTGACGCCGCCGCCTCTCCTTGCGGCTATCTTCCCATGGGATCGCGGTGGGGAGTACATTGACAATGGCTTGCAATGGCGGCTAGATGTGTCAGCTGAAGACAGGGCCAATGCTACGGAGGTCGGTAGAGTAGGACGACAGCTAGGGATGGCTGAGTACGGTGATGGTGGCGCGACGCAGTGGCTGGCGGAGCAGGGCCTCCTTCTATCTAGCTTCAGAGATGATGATCAGGCAAGGAAAAGGCTCCTATCAACGGTGACAGCGGTGGCTAACCCACGTGCTCAAGCCAGAAGCGGCCGTTGTGGTATAGGACCAGCGGTGGTGGAGCTCGCTATGGCTGGGGCTGTGGCTCACAGATGGGGGAAGCTAGAGAGGGGTGATGGCTGTTGTGATGGAGCATCTCTCCGTCTCAACAAACAAAGTGAAGGGGCAATCCTGATACCTAATTTTGATTTGGGCTTTCTATTGGTGATCCAAGCCCAATGTTCATCACTTTGGTTAATAACTGGGCCAAGATTCATAGAAAAGTATTTTGAAAAATTGGTGGGCTCACATCATCATCATCACAATGGTGCTGTTCTTCCTAGGTGGCTGCAAGTGCTTCTAACAGAGAAGTTCTACAACGCTTGCATAGTTCATGAAGAAGCAAAGAAGAATGAGAAGAACGTTTATTGCTTGGACTGTTGCACCACTCTCTGCCCTCACTGTTTAGCCCCACATCGCTCTCATAGACTCTTGCAGATTAGAAGGTATGTGTATCATGATGTTATAAGGTTGGATGATGCTGCAAAGTTAATTGACTGCACTTCTGTTCAAGCATACACGACGAACAGTGCAAAAGTGGTGTTTATAAAAGAAAGGGTACAGACAAGGAACTCCAGGGGTAATTCCGGAAATTCGTGCAGTACTTGCGACAGAACACTGCAAGACCCATACCAATTCTGCTCTCTCTCTTGCAAGATCAAATATCTTATTGGAACTAGGGGTGGTCTCTCTGGGTACCTATATGAGTGCAACTATTTGCCCTTCAATGAAACCGGGTTTGATGAGGGTCAATTGACAACTGACTCGGTTCTTGAACCGGCTGGTTCGGTTCGGACCTCATCCGGTTCAGGGGGATGTGTTGGTGGTGGAGTTGATTGTAAGACCACCCTAGCTTGCACTGCCACCACCGAATTTGTGAGGAAAAAGCGAAGTTCCAGTTCGGCTTCTCGTCCGACCGCGCCAGTTTGTCGACCGGTTCATGACATTTCGGTTTGTCTTTCGAACCGGCGGAAAGGGAACCCACAGAGGGCCCCACTTTATTAG 2037 0.4865 MIQEEEKNLKIQANSDPHTNADPEDEEKDNLEFQAHNQTQMQSHIIPDLANTSTKLQTEIQIYTTEEDEIDAVSNQRQQDDSTEIQISVIQRIQLQSQLKHSNTKSSVSEIQEDEVEFDEKSIYYGSDDQRATIVVDRPPPEPPDMHSVAVGESESGLSVTTAEESSRRPENLEMVTAIHSGAEDGAVAKGNVVDVGSADLNRGSSAVVGAFAEGMWTATGRTTAATVVDRGLRARRLRRFFSLTPPPLLAAIFPWDRGGEYIDNGLQWRLDVSAEDRANATEVGRVGRQLGMAEYGDGGATQWLAEQGLLLSSFRDDDQARKRLLSTVTAVANPRAQARSGRCGIGPAVVELAMAGAVAHRWGKLERGDGCCDGASLRLNKQSEGAILIPNFDLGFLLVIQAQCSSLWLITGPRFIEKYFEKLVGSHHHHHNGAVLPRWLQVLLTEKFYNACIVHEEAKKNEKNVYCLDCCTTLCPHCLAPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQAYTTNSAKVVFIKERVQTRNSRGNSGNSCSTCDRTLQDPYQFCSLSCKIKYLIGTRGGLSGYLYECNYLPFNETGFDEGQLTTDSVLEPAGSVRTSSGSGGCVGGGVDCKTTLACTATTEFVRKKRSSSSASRPTAPVCRPVHDISVCLSNRRKGNPQRAPLY 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120911g00003 678 MobiDBLite consensus disorder prediction 19 33 - -
Stsc120911g00003 678 MobiDBLite consensus disorder prediction 137 170 - -
Stsc120911g00003 678 CDD Bbox2 453 491 - -
Stsc120911g00003 678 Pfam PLATZ transcription factor 492 564 IPR006734 -
Stsc120911g00003 678 MobiDBLite consensus disorder prediction 1 41 - -
Stsc120911g00003 678 ProSiteProfiles Zinc finger B-box type profile. 448 491 IPR000315 GO:0008270
Stsc120911g00003 678 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 436 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120911g00003 Stsc-Chr120911 39602 45182 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc120911g00003 PLATZ 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120911g00003 - - pvu:PHAVU_008G142900g 358.992