Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120910g00015 ATGGCGCACGAAGGGGATGCAGCTGGGAGAGGCGGCGACAAAGGCAAGGAACGCGACGCCTCCGGCGTTGATGGAGGTGCGGCGGTGAAGTCGCAGGAGAGAGATCTGTCACTGAGATTAGGTCTTCGTGGATATACCAATCATAATTCACAACCATGCCCAACCCATCACCCTTCACCACTTGATCTCAATTTTGAAATTCCACCACCAAAAGCTAGTGGTGTGAAGCGTCTCTTGCGCCATCTCACTCACAATGGATTCTTTGACATAGTAAGAATCCATGATCATGATGATGAAGAAAAGGAAGCATATACACTCACTGTTGCTTCTAAGCTTCTTGTTAGAGGCTCAAGCAATTGTTTATCTCCAATTGTCAAGTGTTTTCTTGATCCAGCTATGTCATCATCAGGGTTGGAATTTATTGTGGATGTTGGAGGTGGAAATGGGACCTTATGTAAGATTATTGGTGAGATGTTCCCAAAGTTGAAATGCATAGTTTTTGACCTTCCAAAAGTTGTAGAGAACTTTTTGGAAACAAATAATAATAATAATAATAATTTGAAATATGTTGGTGGAGACATGTTCAATGATTCTATCCCTGAGGCTGACGCTGTTCTACTCAAGTCGTCCCCTTTCCTTCAACGGGAATATTATCTCTTATAG 663 0.4268 MAHEGDAAGRGGDKGKERDASGVDGGAAVKSQERDLSLRLGLRGYTNHNSQPCPTHHPSPLDLNFEIPPPKASGVKRLLRHLTHNGFFDIVRIHDHDDEEKEAYTLTVASKLLVRGSSNCLSPIVKCFLDPAMSSSGLEFIVDVGGGNGTLCKIIGEMFPKLKCIVFDLPKVVENFLETNNNNNNNLKYVGGDMFNDSIPEADAVLLKSSPFLQREYYLL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120910g00015 220 Pfam O-methyltransferase domain 134 209 IPR001077 GO:0008171
Stsc120910g00015 220 Gene3D - 39 109 IPR036388 -
Stsc120910g00015 220 PANTHER O-METHYLTRANSFERASE 138 208 IPR016461 GO:0008168
Stsc120910g00015 220 MobiDBLite consensus disorder prediction 1 23 - -
Stsc120910g00015 220 Gene3D Vaccinia Virus protein VP39 110 210 IPR029063 -
Stsc120910g00015 220 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 210 IPR029063 -
Stsc120910g00015 220 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 220 IPR016461 GO:0008168
Stsc120910g00015 220 MobiDBLite consensus disorder prediction 1 30 - -
Stsc120910g00015 220 SUPERFAMILY "Winged helix" DNA-binding domain 59 117 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120910g00015 Stsc-Chr120910 87366 94558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120910g00015 111 208 Monolignol Biosynthesis Gene Families AT5G54160 38.776 6.22e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120910g00015 - K22588 gmx:100800912 123.635