Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120910g00011 ATGGCTACAGGAGAGGTGGTAGCTGTGAAGATGCTTGCACCTAACTCCAAACAAGGGGAGAAGGAGTTCCAGACAGAGGTACTTCTGCTAGGAAGATTGCATCATCGGAATCTTGTGAACTTGTTAGGATACTGTGTAGATAAAGGACAGCGTATGTTAGTTTATGAATTCATGAGCAATGGAAGTTTATCAAACCTTTTATATGATGAAGACAAGGATCTGAGTTGGGATGACAGGCTGCAGATTGCTGTTGATATTTCACATGGAATACAATACCTTCATGAAGGAGCAGTCCCGCCAGTGATACATCGCGATTTGAAATCGGCCAACATATTGCTAGATCACTCCATGAGAGCTAAGGTGGCTGATTTTGGGCTATCAAAGGAAGAGGTCTTTGATGACCAGAAATCTGGCCTTAAAGGGACATATGGCTATATAGATCCAGCATACATCTCCACGAGCAAGTTCACAACCAAGAGTGACATTTACAGTTTTGGTATAATAATCTTTGAGCTCATTACAGCCATCCACCCCCACCAAAACTTGATGGAATACATTAACCTTGCTGCAATGGACTATGATGGCATAGATGGGATTCTTGATTCACAACTTGTGGGGAAATGCAACCTTGAAGAGGTGAGGAAGTTAGCCAAAATTGCACACAAATGTTTGCATAAATCACCAAGGAAAAGGCCCTCTATTGGTGAGATCTCACAAGGTATAATGATGATTAAGCAAAGGCGCCTTGTGAAGGAAGATACCATGTCATTTGCAAGCAGTAATTACTCAAGAACTTTGAGTAGGATAGAGGATCAACAAGTTGAGTTAAGTAGGATAGCCACTACCATGAACCAAAGAGAAGGTAGATGA 870 0.4172 MATGEVVAVKMLAPNSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCVDKGQRMLVYEFMSNGSLSNLLYDEDKDLSWDDRLQIAVDISHGIQYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDDQKSGLKGTYGYIDPAYISTSKFTTKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDYDGIDGILDSQLVGKCNLEEVRKLAKIAHKCLHKSPRKRPSIGEISQGIMMIKQRRLVKEDTMSFASSNYSRTLSRIEDQQVELSRIATTMNQREGR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120910g00011 289 PIRSF ILK 2 256 - -
Stsc120910g00011 289 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Stsc120910g00011 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Stsc120910g00011 289 SMART serkin_6 3 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120910g00011 289 Pfam Protein tyrosine and serine/threonine kinase 5 239 IPR001245 GO:0004672|GO:0006468
Stsc120910g00011 289 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120910g00011 289 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 58 265 - -
Stsc120910g00011 289 Gene3D Transferase(Phosphotransferase) domain 1 59 265 - -
Stsc120910g00011 289 SUPERFAMILY Protein kinase-like (PK-like) 2 238 IPR011009 -
Stsc120910g00011 289 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120910g00011 Stsc-Chr120910 63362 65266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120910g00011 3 237 Glycoside Hydrolase AT3G07070 43.775 7.20e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Stsc120910g00011 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120910g00011 - - gmx:100794239 513.072