Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120910g00006 ATGCAAAATGGATCTGCTCATGAGAAAAATGATGTCTCTCCGTTATTGCCCAAAAATGTACAGAACCCAATAGAGTCTGACTTGTCAACAACTACTATCCAAAAGGGCCACACCATCGGTTCATCTGCAGAAGCAGTTCCATTGGGCATGCAAATGAGACTGGATGTATTTGACCCAGTTGTAAGCAGTGGTATGCCAACCCAACGTCTGCATCAACCTATATCTAATGCTGATATGTCTTTACAAATCCAGCCCCAAGTTTTGCTTAGTAAACCAAGCAGGGGAAACTACATGGTTTCGGATAATATATTGATGGAACATGAAGAGCTGACAAATGAAAGTGAGACCGAAAGCATTTCAAATGCGTACTCTCAAGGAGTATTAGATACTCTTACACAAGCTCTGCAGTCATCAGGCGTGGATCTGTCTCAGACTAATGTCTCAGTGCAAATCGATGTTGGTAGAAGATCAAATCCGGGCTTTACCCCTTCTGCATCTAGCTCAAAGGTGTACGGAAACCAGTTTGTGACCAATAGAGTTAATTACTGCAGTGAAGACTCTGATCAAAGTCTAAAGAGGCTCAGAAGAGATGCAACCTAA 600 0.4233 MQNGSAHEKNDVSPLLPKNVQNPIESDLSTTTIQKGHTIGSSAEAVPLGMQMRLDVFDPVVSSGMPTQRLHQPISNADMSLQIQPQVLLSKPSRGNYMVSDNILMEHEELTNESETESISNAYSQGVLDTLTQALQSSGVDLSQTNVSVQIDVGRRSNPGFTPSASSSKVYGNQFVTNRVNYCSEDSDQSLKRLRRDAT 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120910g00006 199 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 7 196 IPR044295 GO:0003700|GO:0006351|GO:0046983
Stsc120910g00006 199 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120910g00006 Stsc-Chr120910 50508 51980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120910g00006 104 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 53.030 3.44e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120910g00006 - - gmx:100791730 238.424