Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120908g00013 ATGGAGGTACAGGGGAAGCGATTGAAGCCACGCCTGGATCGGCGCAACGCCATGAAGAACATCAATTACAAAGAACCCTCTTCCTCCTCCATGGACTTGAACAACCAAACTAGCTTCAGGGTTGACGACGGCGAATTTGACTTCATCTTCCGCAGCCTCGGTCTCTCTGGACCAGAAGACTTTTCTATTCCAACCGCAGCTTGGGAACAAGCCCAAAGGTCTCGCCTTTCTCCTTCCCCTCTCACCCCCAAAAACATCATCACCCTCCACGTTGTGGAGAAATATGAAGACCATGCTCCAATTCCAGTTATTCCACCTGAAGCTGAATCTGGGGTTAGGCTGAAAACTCTAAGCTTTCAGCAACTTGGTCAGCATAACGTAAAGGGTGGTGGTGATGATTGGGTTAATAAGCAGGTTTTGACTGAGAATTTTAGAGATGGTGGGGGGATCAAGGGTGTGAGGCCTCCACCGGTGATGTTGCGGCCACCACTTGATGATGACAATGATGTTGATGCTGCAGATGAAAGGGTCTTCGAAGAGAGTGGGGATCTTGATGCTTCTGATGATGACAGTGATGTTGCTAGTGGTGAGGTTTCCAACGTTGTTGATGAGTCAAATGTTCATAACGTGTCGCCAAATGGGTCTTTTAGGAGAACGTTTATGTCGTGGCAAAAGGGCGAGATTCTTGGTAAAGGCTCATTTGGAACGGTTTATGAAGGCTTTACCGATGATGGATTCTTTTTCGCGGTTAAGGAGGTATCTTTGTTGGATGAAGGAAGCCAGGGTAAACAGAGCATTTTCCAACTTCAACAGGAAATATCTCTTTTGAGTCAGTTTGAACACGAGAACATAGTGAGATATCTCGGCACAGACAGGGACAATAACATGCTGTACATCTTTTTGGAGCTTGTGACAAAAGGATCATTGGCAAGTCTTTATCGGAAGTATAGTTTGAAGGATTCTCAGGTATCAGCATACACAAGACAGATTCTAAGTGGTTTGAAGTATCTCCATGATCGTAATGTAGTTCACAGGGACATCAAGTGTGCTAACATATTGGTTGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGTTTGGCAAAGGCAACTAAATTGAACGATGTTAAATCAAGCAAAGGTTCCCCATATTGGATGGCCCCTGAGGTTGTTAACCTACGAAACCGTGGTTATGGACTAGCAGCTGATATATGGAGCTTGGGATGTACAGTTTTGGAGATGTTAACACGGCAACCTCCTTATTCTCATTTAGAAGGAATGCAAGCCCTATTTCGGATAGGGAGAGGTCAAGCACCACCAGTTCCAGAATCATTATCAAAAGATGCAAGAGATTTCATTATGAAATGCTTACAAGTGAATCCAAGTAAACGGCCAACCGCTGCTCAGCTATTTGATCATCCATTTGTAAAGAGGCCACTTCTATCCCCCATAAGTCTTGTATCTCCACGCATTAATCTTCTTCTCTCTTAA 1491 0.4447 MEVQGKRLKPRLDRRNAMKNINYKEPSSSSMDLNNQTSFRVDDGEFDFIFRSLGLSGPEDFSIPTAAWEQAQRSRLSPSPLTPKNIITLHVVEKYEDHAPIPVIPPEAESGVRLKTLSFQQLGQHNVKGGGDDWVNKQVLTENFRDGGGIKGVRPPPVMLRPPLDDDNDVDAADERVFEESGDLDASDDDSDVASGEVSNVVDESNVHNVSPNGSFRRTFMSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDEGSQGKQSIFQLQQEISLLSQFEHENIVRYLGTDRDNNMLYIFLELVTKGSLASLYRKYSLKDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGQAPPVPESLSKDARDFIMKCLQVNPSKRPTAAQLFDHPFVKRPLLSPISLVSPRINLLLS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120908g00013 496 ProSiteProfiles Protein kinase domain profile. 223 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120908g00013 496 MobiDBLite consensus disorder prediction 1 20 - -
Stsc120908g00013 496 SMART serkin_6 223 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120908g00013 496 Pfam Protein kinase domain 224 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120908g00013 496 PRINTS Tyrosine kinase catalytic domain signature 301 314 IPR001245 GO:0004672|GO:0006468
Stsc120908g00013 496 PRINTS Tyrosine kinase catalytic domain signature 336 354 IPR001245 GO:0004672|GO:0006468
Stsc120908g00013 496 PRINTS Tyrosine kinase catalytic domain signature 402 424 IPR001245 GO:0004672|GO:0006468
Stsc120908g00013 496 PRINTS Tyrosine kinase catalytic domain signature 445 467 IPR001245 GO:0004672|GO:0006468
Stsc120908g00013 496 ProSitePatterns Protein kinases ATP-binding region signature. 229 251 IPR017441 GO:0005524
Stsc120908g00013 496 MobiDBLite consensus disorder prediction 21 35 - -
Stsc120908g00013 496 MobiDBLite consensus disorder prediction 146 170 - -
Stsc120908g00013 496 FunFam Mitogen-activated protein kinase 1, putative, expressed 221 489 - -
Stsc120908g00013 496 Gene3D Transferase(Phosphotransferase) domain 1 221 488 - -
Stsc120908g00013 496 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 115 480 - -
Stsc120908g00013 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 342 354 IPR008271 GO:0004672|GO:0006468
Stsc120908g00013 496 SUPERFAMILY Protein kinase-like (PK-like) 216 489 IPR011009 -
Stsc120908g00013 496 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120908g00013 Stsc-Chr120908 54441 56833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120908g00013 11 73 MAP Kinase Kinase Kinase AT4G08500 37.805 9.63e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc120908g00013 Pkinase 4.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120908g00013 - K13414 var:108347588 569.696