Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120908g00010 ATGAGAAATCCTTTTCTTCAGGGGTACTTGCTGGGTAATGCTGAAACAACTCGAACGGAGGATAACTATCAAATCCTATTTGCTCATGGAATGGGACTAATTTCTGATGAACTATACCAGTCACTGCAAAAAAATTGTAAAGGAGAATATATAAAAGATCACACTAGAACGGCATTATGTTCAAGAGATCTCAAGTCCTTTGATGAGATGATATCAGGACTTTATAAACCCCATATTTTGGAACCTAATTGCGAATTTGGTTCACCTAAGCCATTGAAGGCTTCTTGGAGGCGATCCATAACTGAAAACTATCCTTTGAAGTTTGTCAGCGACACTCGTCTCGGATTACCACCCTTGAGCTGCCGGAGTTATGCATACTCCCTTAGTGGTTATTGGTCCAATGATGACAATGCACAGAAAGCGGAACAAAAAAGGAATGGCAACGCTGCCCCCTTGAATATACCTAACAAGGAGGATATCCCTAGCAGCTTTCCATATCATGTAAAGCTCAGCAGAAAAGGATATCGTTCGCTGATATACAATGGCGATCATGACATGTATACTCCTTTCATGGCGACTCAAGCGTGGATAAGATCGCTAAACTACTCAATCGTCAATGGTTGGAGGCCATGGTATACAAATGGCCAAGTTGCAGGGTACACAAGAACTTACTTCAATGTGATGACATTTGCAACTGTCAAGGGTGGAGGGCACACAGCTCCCGAATTCAAGCCTGAAGAATGCTTCTACATGTACAGTAGGTGGATCTCTAACAGGCCATTGTAG 786 0.4237 MRNPFLQGYLLGNAETTRTEDNYQILFAHGMGLISDELYQSLQKNCKGEYIKDHTRTALCSRDLKSFDEMISGLYKPHILEPNCEFGSPKPLKASWRRSITENYPLKFVSDTRLGLPPLSCRSYAYSLSGYWSNDDNAQKAEQKRNGNAAPLNIPNKEDIPSSFPYHVKLSRKGYRSLIYNGDHDMYTPFMATQAWIRSLNYSIVNGWRPWYTNGQVAGYTRTYFNVMTFATVKGGGHTAPEFKPEECFYMYSRWISNRPL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120908g00010 261 FunFam Carboxypeptidase 163 258 - -
Stsc120908g00010 261 FunFam Carboxypeptidase 120 261 - -
Stsc120908g00010 261 Gene3D - 123 261 - -
Stsc120908g00010 261 Gene3D alpha/beta hydrolase 2 86 IPR029058 -
Stsc120908g00010 261 SUPERFAMILY alpha/beta-Hydrolases 6 261 IPR029058 -
Stsc120908g00010 261 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 245 IPR001563 GO:0004185|GO:0006508
Stsc120908g00010 261 Pfam Serine carboxypeptidase 6 258 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120908g00010 Stsc-Chr120908 40904 42446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120908g00010 118 261 Calmodulin-binding Proteins AT2G22960 53.691 1.59e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120908g00010 K16296 - gmx:100792006 356.295