Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120908g00006 ATGGCGTCGCCCAACGTGGTCACCACTCATCCCGATCTGCCACGTGACTCATCCCTCTGTTCCATTTCGACCCTGCTTGCAGATGCACAAGGAGAAGATCAAGAAGAAGATGAAGGAGAAGGTTCCAATAACAAGGCGGCCATGGAAGATTTTCTGAACTCTATATACTCGTCGAACGAGATGGATCAGGTGTGGAAGGACATGGTGGGAGGCACGAGCACTGAAGAGAAAGAGAAAGAAAAAGAAATGACATTGGAGGATTACCTTAGAAGAGGAAAGAGGAAGGGTGGTGTTAGTAGTTTCCCTGTCCCTGTGGAGGTGGTTGACAAGGCTATCCTTCAGAAGCATAGGAGGATGATCAAGAACAGAGAGTCTGCTGCCAGGTCCAGGGAACGCAAGCAGGCTTACACCCTTGAGTTAGAGTCTTTGGTTCTTCAACTCGAGGCTGAGAATGCTCGATTATTACAGGAACAGGCACAAATCAAGAAGCAGAGGTACAACCAGCTCATGGAGAGCATCATTCCAGTTCATGAAAAGCGTAAACCAAGACCAATGCTTCGCAGACTCAATTCACTCCAATGGTGA 585 0.4803 MASPNVVTTHPDLPRDSSLCSISTLLADAQGEDQEEDEGEGSNNKAAMEDFLNSIYSSNEMDQVWKDMVGGTSTEEKEKEKEMTLEDYLRRGKRKGGVSSFPVPVEVVDKAILQKHRRMIKNRESAARSRERKQAYTLELESLVLQLEAENARLLQEQAQIKKQRYNQLMESIIPVHEKRKPRPMLRRLNSLQW 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120908g00006 194 Pfam bZIP transcription factor 113 170 IPR004827 GO:0003700|GO:0006355
Stsc120908g00006 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 117 132 IPR004827 GO:0003700|GO:0006355
Stsc120908g00006 194 CDD bZIP_plant_BZIP46 114 163 - -
Stsc120908g00006 194 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 102 175 IPR043452 GO:0003700|GO:0045893
Stsc120908g00006 194 SUPERFAMILY Leucine zipper domain 114 165 IPR046347 GO:0003700|GO:0006355
Stsc120908g00006 194 Coils Coil 133 172 - -
Stsc120908g00006 194 Gene3D - 114 168 - -
Stsc120908g00006 194 MobiDBLite consensus disorder prediction 25 52 - -
Stsc120908g00006 194 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 112 173 - -
Stsc120908g00006 194 SMART brlzneu 110 174 IPR004827 GO:0003700|GO:0006355
Stsc120908g00006 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 112 164 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120908g00006 Stsc-Chr120908 25600 26711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120908g00006 53 194 bZIP Transcription Factor Family AT1G03970 39.378 2.19e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc120908g00006 bZIP_1 4.4e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120908g00006 K14432 - cave:132166742 145.591