Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120908g00005 ATGAATTTGGAGACCATATCCAGAAAATTGATAAAGCCATCAAAACCAACACCACCAAACCTTGAAATATTCAACATGTCCCTTCTAGACCAGCTTTCCCCAAACATCCATGGAAACATGACCCTCTTCTACCCTCACAAAACACCTTCTTCCCCGGAATTCTCCCTCAAATCTCAACTTCTTCAGGACTCACTCTCTCAAATCTTGACGCTCTTCTACCCTCTCGCCGGCCGCCTCCGAGACGCCGCCACCATCCACTGCAACGATCTAGGAGCTTTCTTCATCCAATCAAGAACCACCACCACTCTCTCCGAAATCATCTCTCCTCCTAACTTGGCCATCATCCACAATCTTCTCCCTGCCACCGACTCTGAAGCCATGCAACTCTCCGACTCTCCCATGCTCCTTGTCCGCTTTACCTTGTTCGGTTGCGGCGCCACCGCCATCACCATCTCCCTCACTCACAAGATCGCTGACTTTGCCGCCTTGATCACTATCCTCAAGGCATGGACCGCCGCCTGCATCGGCGGAGACACCCAACCGGTTGTCCCCGAGCTCGCCATCGGGTCAGATCTCTTCCCTCCGAGCGAGACTCTTCCCGCCGGGATGTCAGCCTCCGTGAACATCGCGGCGGAGAAGTTCACGACGACGAGGCTCATTTTCGAGCCGTCGAAGATACAAGAGCTGAAGAAGAGGGTGAAGGTGAGGCTCGAGTTTGAGCCGTCGAGGGTTGAGGTTGTTCTTGCTCTCATTTGGAAATGCGCATTGTTATCTTCGTTAAAATCTAAAACGACAGCGTTTAAACCTTCAGCGATGTTCCAGGCAGTGAACCTCCGGCCAAGAATGGAACCTCCTATTCCAGAGACGGCAATGGGGAACTTTGTATGGCCATTCGCAGTCACAGTGAAGGAGGAGTGCGAGTTAGAGGTTGAGGTGTTGGTAAAGAAGATGAGAGATTCATTGAAGGAGTTGATGGAGGGGAAAGTTGAAAGGATGAAGAATTCAGAAGGACGGTTAAGGTATTCGGTGGTGATGGAGGGTTTGAAGGAGAGGGGTGAGATGTTGAAGAAGAAGAGTATTAGTGTTGTTTATAAGTGTTCGAGTTGGTGTAAGATTGGATCATCAATTTATGAGGTTGATTTTGGGTGGGGGAAGCCACTTTGGATGGGTAGCATCAACAACATTGTGAGTAACACCATTGCTTTGACGGATACAAGGGATGGCCATGGCGTTGAAGCTTTTGTCACTTTGGATCAACAACACATGGATTCTTTTCAGCAGTTTCCTCAACTCTTGCATTATGCTTTGATTAATCCCCCTCTTTTTCTCTGA 1332 0.4917 MNLETISRKLIKPSKPTPPNLEIFNMSLLDQLSPNIHGNMTLFYPHKTPSSPEFSLKSQLLQDSLSQILTLFYPLAGRLRDAATIHCNDLGAFFIQSRTTTTLSEIISPPNLAIIHNLLPATDSEAMQLSDSPMLLVRFTLFGCGATAITISLTHKIADFAALITILKAWTAACIGGDTQPVVPELAIGSDLFPPSETLPAGMSASVNIAAEKFTTTRLIFEPSKIQELKKRVKVRLEFEPSRVEVVLALIWKCALLSSLKSKTTAFKPSAMFQAVNLRPRMEPPIPETAMGNFVWPFAVTVKEECELEVEVLVKKMRDSLKELMEGKVERMKNSEGRLRYSVVMEGLKERGEMLKKKSISVVYKCSSWCKIGSSIYEVDFGWGKPLWMGSINNIVSNTIALTDTRDGHGVEAFVTLDQQHMDSFQQFPQLLHYALINPPLFL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120908g00005 443 Gene3D - 1 203 IPR023213 -
Stsc120908g00005 443 Gene3D - 211 433 IPR023213 -
Stsc120908g00005 443 PANTHER F21J9.9 4 428 - -
Stsc120908g00005 443 Pfam Transferase family 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120908g00005 Stsc-Chr120908 23902 25233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120908g00005 1 428 Monolignol Biosynthesis Gene Families AT5G48930 22.979 1.98e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120908g00005 - - aip:107620102 608.601