Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120907g00022 ATGGCTGAGGTTGGAGTCGTTAGTACAAGAGCTCCAGCACTGTTGGCTGCCATGGAAGTAGCTGTTGCTGTAACTTCACCTTCGTCACCAGATGAACCCTCACTCAAGAGAAGAAAGATCAAAAGCCAAGAAGCTGAAACAAGCCAAGATCTCATCAAATTCTCAGCATCCTCATTCGCTGATGACCAGCTTAAGAGTAGCATTGCAAGCGAGGAAACAATGCCAGGGGAGGTGGCGGAAGAGGAGGAGGAGGAGGAGGAGGAACGGTTCTCCGACTCCAACCAATCTCCGGCGTCGTGTTGTTCGACCAATAACGCATCCTCTTCCTGGCTCCACGAAGAGAGCATCAAATTCTTAGATCTTGAGGTCCAGAGCTCCCAGCAGGCTGAAACGTTGGCTTGCAACTGCGATAACCAAATAAGGAGAGAAATGAGCCTCAGCAGTGAGCTAGGAATGAATTGGCAAGAAGTGGAATCATCGTCAATGGATAATACTAAGAAAAATAAATCAACAAAAAGAACAACAATGGTCAATAATAATTCCCGCTTTGCTCAATCAACCAAGATGCCAACAGAGTTGGAGCTTGAAAAGTTCTTCGCTACCGCTGAGAAAGACATCCAGAAACGATTTTCAGACAAGTATAATTTTGATATTGTGAAGGATGTGCCATTGGAAGGACGCTACGAGTGGATTCAAGTAAAATTAACCCCATAA 714 0.4538 MAEVGVVSTRAPALLAAMEVAVAVTSPSSPDEPSLKRRKIKSQEAETSQDLIKFSASSFADDQLKSSIASEETMPGEVAEEEEEEEEERFSDSNQSPASCCSTNNASSSWLHEESIKFLDLEVQSSQQAETLACNCDNQIRREMSLSSELGMNWQEVESSSMDNTKKNKSTKRTTMVNNNSRFAQSTKMPTELELEKFFATAEKDIQKRFSDKYNFDIVKDVPLEGRYEWIQVKLTP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120907g00022 237 MobiDBLite consensus disorder prediction 75 90 - -
Stsc120907g00022 237 Gene3D p27 182 236 IPR044898 -
Stsc120907g00022 237 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 42 234 IPR044275 GO:0004861|GO:0045736|GO:0051726
Stsc120907g00022 237 MobiDBLite consensus disorder prediction 62 106 - -
Stsc120907g00022 237 MobiDBLite consensus disorder prediction 23 48 - -
Stsc120907g00022 237 Pfam Cyclin-dependent kinase inhibitor 189 232 IPR003175 GO:0004861|GO:0005634|GO:0051726
Stsc120907g00022 237 MobiDBLite consensus disorder prediction 32 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120907g00022 Stsc-Chr120907 116502 118270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120907g00022 185 234 Core Cell Cycle Gene Families AT5G48820 60.000 7.09e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120907g00022 - - ahf:112720459 298.901