Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120904g00005 ATGGGAAGCCAAGATGTGAAGCTGAAGGGTGTTGATTATGAGTACATAGAACAAGATGTATTCAACAAGAGCAGCCTCCTTCTGGAGCTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTTCATGGCAACAAGGCAATCTCAGAGTCATTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGCATCCACTGCTGCCTCAGGATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTAATTTTGCTGAACAAAAGCTATTGTATGCTGCATTCATTGCAATGGTGGCGAGCAGGGATGACACCGAAAAGGCTCTGAATGTAGCAAGAGAATCAGTAGAAAAGATAGAACAAGAGATTAAGGGGAAGAAATTCTTTGGAGGAGACAACATAGGATACCTTGACATTGCACTTGGATGGATATCTTACTGGATACCTATCTATGAGGAAGTTGGATCAATGCAGATATTAGACCCTTTGAGATTCCCAGCCATCAATACATGGATGAACAATTTCCTCAACCACCCTGTGATCAAGGACAGATTGCCCCAAAGAGATGACATGGTTGTTTACTTCCGCGGTCGCAAGAAGATTGTGTCTCCTGCCTACCATGGCTTGATGAAGTATCTTTGA 636 0.4371 MGSQDVKLKGVDYEYIEQDVFNKSSLLLELNPVHKKVPVLVHGNKAISESFVILEYIDETWKQHPLLPQDPYQRAHARFWANFAEQKLLYAAFIAMVASRDDTEKALNVARESVEKIEQEIKGKKFFGGDNIGYLDIALGWISYWIPIYEEVGSMQILDPLRFPAINTWMNNFLNHPVIKDRLPQRDDMVVYFRGRKKIVSPAYHGLMKYL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120904g00005 211 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 189 IPR045073 -
Stsc120904g00005 211 Pfam Glutathione S-transferase, N-terminal domain 7 59 IPR004045 -
Stsc120904g00005 211 Pfam Glutathione S-transferase, C-terminal domain 86 177 IPR004046 -
Stsc120904g00005 211 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 70 193 IPR010987 -
Stsc120904g00005 211 Coils Coil 100 120 - -
Stsc120904g00005 211 Gene3D Glutaredoxin 5 66 - -
Stsc120904g00005 211 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 65 IPR004045 -
Stsc120904g00005 211 FunFam Tau class glutathione S-transferase 67 202 - -
Stsc120904g00005 211 Gene3D - 67 203 - -
Stsc120904g00005 211 SFLD Main (cytGST) 7 199 - -
Stsc120904g00005 211 SFLD Main.3: Omega- and Tau-like 7 199 IPR045073 -
Stsc120904g00005 211 SUPERFAMILY Thioredoxin-like 7 67 IPR036249 -
Stsc120904g00005 211 CDD GST_C_Tau 71 196 IPR045074 GO:0004364|GO:0006749
Stsc120904g00005 211 SUPERFAMILY GST C-terminal domain-like 59 198 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120904g00005 Stsc-Chr120904 18139 19049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120904g00005 6 196 Glutathione S-transferase Gene Family AT2G29420 43.979 1.46e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120904g00005 K00799 - gmx:547583 318.931