Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120904g00004 ATGGAAAGAAGCGAAGATGTGAAGCTGTTGAGCTTTCATTCGAGTCCATTTGGTCAGAGAGTGATTTGGGCTCTGAAACTGAAGGGTGTTGATTATGGCTACATAGAACAAGACATCTTCAACAAAAGCACCCTTCTTCTTGAGCTGAACCCGGTTCTCAGGAAGGTGCCAGTTCTTGTTCACTGCAACAGACCAATTGCAGAATCATTGGTGATCCTTGAATACATCGATGAAACATGGAAGCAGTTTCCATTGATGCCTCATGATCCCTATCAAAGAGCTCATGCTCGCTTTTGGGCTAATTTTGCAGAACACAAGCTTTTGGAGGCTGCGTGGATCGCAATGCGTAGTAGTGGGAAAGAACAGGAAAAGGCTGTGAATGAGGCAAGAGAAGCAGTGGAAAAGATAGAACAAGAGATTAAGGGGAAGAGATTCTTTGGAGGGGACAACATTGGTTACCTTGATATTGCTCTTGGATGGATCTCTTACTGGATTCCAGCCTGGGAAGAAGTTGGATCAATGAAGATATTAGACCCTTTCAGATTCCCAGCCATCAATGAATGGATCACCAATTTCCTCAGCCACCCTATCATCAAGGACGCTTTGCCCCAAAGAGACAACATGATTACTTATTACCACAGTCGCAGAAAGGAAGTTTCTCCATCTTGA 669 0.441 MERSEDVKLLSFHSSPFGQRVIWALKLKGVDYGYIEQDIFNKSTLLLELNPVLRKVPVLVHCNRPIAESLVILEYIDETWKQFPLMPHDPYQRAHARFWANFAEHKLLEAAWIAMRSSGKEQEKAVNEAREAVEKIEQEIKGKRFFGGDNIGYLDIALGWISYWIPAWEEVGSMKILDPFRFPAINEWITNFLSHPIIKDALPQRDNMITYYHSRRKEVSPS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120904g00004 222 FunFam Tau class glutathione S-transferase 86 222 - -
Stsc120904g00004 222 FunFam Tau class glutathione S-transferase 1 88 - -
Stsc120904g00004 222 Pfam Glutathione S-transferase, C-terminal domain 124 189 - -
Stsc120904g00004 222 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Stsc120904g00004 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Stsc120904g00004 222 Gene3D Glutaredoxin 1 85 - -
Stsc120904g00004 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 208 IPR045073 -
Stsc120904g00004 222 Gene3D - 86 221 - -
Stsc120904g00004 222 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Stsc120904g00004 222 Coils Coil 119 139 - -
Stsc120904g00004 222 SFLD Main (cytGST) 4 219 - -
Stsc120904g00004 222 CDD GST_C_Tau 90 211 IPR045074 GO:0004364|GO:0006749
Stsc120904g00004 222 SFLD Main.3: Omega- and Tau-like 4 219 IPR045073 -
Stsc120904g00004 222 SUPERFAMILY GST C-terminal domain-like 78 217 IPR036282 -
Stsc120904g00004 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Stsc120904g00004 222 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120904g00004 Stsc-Chr120904 17004 17771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120904g00004 4 220 Glutathione S-transferase Gene Family AT2G29420 43.318 5.73e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120904g00004 K00799 - gmx:547583 352.443