Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120904g00003 ATGGGAAGCGAAGATGTGAAGTTGGTGAGCTTTTGGGTGACTCCTTTCGGTAAAAGAGTTGAATGGGCTCTGAAACTGAAGGGTGTGGATTATGAGTACATAGAAGAAGATATATACAACAAGAGCAACCTCCTTCTTGAGCTGAACCCTGTTCACAGGAAGGTTCCGGTTCTTGTTCATGGCGACAAGGCAATGGCAGAGTCACTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGTATCCATTGATCCCTCACCATCCTTATGAAAGAGCTCATGCCCGATTTTGGGCTATTACTACTGAACAAAAGCTTGGGGAAGCTTCATGGAATGCGCTGATTAGCAGCGGAGATGTAAAGGAAAAAGCTCTAAATACAGCCTCAGAGATACTTGAGAAGATAGAGGAAGAGATCAAGGGTAAGAAATTCTTTGGAGGGGACAACATCGGATACCTGGACATTGCCCTTGGATGGATCCCTTGCTATCTTCCCCTTTGGGACGAAGTTGGGTCAATGCAGATAATTGACCCTCTCAAATTCCCAGCTTTGAATAAATGGATGACCAATTTCCTCAGCCACCCTGTGATCAAGGAGTCCTTGTTCCCAAGAGACAAAGCCCTCGATTACTTCCACTATCTTAAAAATAGACATGCTCCTAATAATTCTTCTTAA 675 0.4385 MGSEDVKLVSFWVTPFGKRVEWALKLKGVDYEYIEEDIYNKSNLLLELNPVHRKVPVLVHGDKAMAESLVILEYIDETWKQYPLIPHHPYERAHARFWAITTEQKLGEASWNALISSGDVKEKALNTASEILEKIEEEIKGKKFFGGDNIGYLDIALGWIPCYLPLWDEVGSMQIIDPLKFPALNKWMTNFLSHPVIKESLFPRDKALDYFHYLKNRHAPNNSS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120904g00003 224 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc120904g00003 224 Gene3D - 85 222 - -
Stsc120904g00003 224 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Stsc120904g00003 224 FunFam Tau class glutathione S-transferase 85 220 - -
Stsc120904g00003 224 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Stsc120904g00003 224 CDD GST_N_Tau 6 79 - -
Stsc120904g00003 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Stsc120904g00003 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Stsc120904g00003 224 Gene3D Glutaredoxin 1 84 - -
Stsc120904g00003 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Stsc120904g00003 224 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Stsc120904g00003 224 SFLD Main (cytGST) 2 219 - -
Stsc120904g00003 224 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Stsc120904g00003 224 Pfam Glutathione S-transferase, C-terminal domain 120 195 IPR004046 -
Stsc120904g00003 224 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120904g00003 Stsc-Chr120904 15478 16762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120904g00003 4 209 Glutathione S-transferase Gene Family AT2G29490 48.077 7.75e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120904g00003 K00799 - gmx:100305870 334.724