Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120904g00002 ATGGGGAGTCAAAAGGAGGAGGTGAAGCTTCTAAGCTTTGTGTGTAGTCCAGTTTGTCGCAGAGTTGAATGGGGTCTGAGACTAAAGGGTGTTGATTACGAGTACATAGAAGAAGACATCTTCAACAAGAGCAACCTCCTTCTTCAGCTGAACCCTCTTCACAAGAAGGTTCCTGTTCTTGTTCATGCTAACAAGCCAATTGCCGAGTCCCTCGTCATACTCGAATACGTTGACGAAACATGGAACCATCAATATCCACTTCTGCCTCAACATCCTTATGAAAGAGCTCTTACACGTTTCTGGATCAAGTTTGCAGATGAAAAGGTTATGTACGGTGGATATGTTGCAATGATATCGAGCGGGGATGAACAGGAAAAGAAAGTGAATGAGGTGAGGGAAGGAATGGAAAAGTTAGAAGAGTTGATAAAAGGGAAGAGATTCTTTGGAGGTGACAAGGTTGGATTCCTTGACATAGCACTTGGATGGATCACTTACTTGCTTCCTGTTTGGGAGGAGGTTGGGTGTATGAAGATTCTGGAGGCAGAAAAGTGTCCTGCTATCTCTGCTTGGGTCAACAACATTCTCAGCCACCCTGTCTTCAAGGACTGCCTCCCACCTAAGGAAGAATTGCTTGCTTATAACCACCGTCGCAGAAAGCACTTCAATCCTGCTCTTTATAATTAA 684 0.443 MGSQKEEVKLLSFVCSPVCRRVEWGLRLKGVDYEYIEEDIFNKSNLLLQLNPLHKKVPVLVHANKPIAESLVILEYVDETWNHQYPLLPQHPYERALTRFWIKFADEKVMYGGYVAMISSGDEQEKKVNEVREGMEKLEELIKGKRFFGGDKVGFLDIALGWITYLLPVWEEVGCMKILEAEKCPAISAWVNNILSHPVFKDCLPPKEELLAYNHRRRKHFNPALYN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120904g00002 227 FunFam Tau class glutathione S-transferase 1 90 - -
Stsc120904g00002 227 Coils Coil 121 141 - -
Stsc120904g00002 227 CDD GST_N_Tau 8 81 - -
Stsc120904g00002 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc120904g00002 227 FunFam Tau class glutathione S-transferase 88 224 - -
Stsc120904g00002 227 SUPERFAMILY GST C-terminal domain-like 79 220 IPR036282 -
Stsc120904g00002 227 CDD GST_C_Tau 92 213 IPR045074 GO:0004364|GO:0006749
Stsc120904g00002 227 Gene3D Glutaredoxin 1 87 - -
Stsc120904g00002 227 Pfam Glutathione S-transferase, C-terminal domain 122 198 IPR004046 -
Stsc120904g00002 227 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Stsc120904g00002 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 221 IPR010987 -
Stsc120904g00002 227 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Stsc120904g00002 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 209 IPR045073 -
Stsc120904g00002 227 SFLD Main (cytGST) 4 222 - -
Stsc120904g00002 227 Gene3D - 88 224 - -
Stsc120904g00002 227 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120904g00002 Stsc-Chr120904 14150 15219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120904g00002 3 222 Glutathione S-transferase Gene Family AT2G29420 48.182 2.27e-69 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120904g00002 K00799 - tpra:123914566 308.531