Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120901g00016 ATGTCTCATATATCGAGCCTCTCCCTCTCCCATGATTTTTCCTCTGCATGTAAGTTTTCTGTTGGTGGAGAAGACCGGGTTGTGGTTGGCACTCTTGACCTTAATCAGTGCTTGAGCCTTCCAGATGAAATTGCAGGGACAAAACCAGAGGTAGATGAACCAGATATCACAAGGGCATACCTCAGCAATGTATGTGTTGCAGAAGAGTTGCACAGAAATGGATTGGGCTATGAACTTCTTGAAAAATCAAAGCTAGTTGCCCATGATTGGGGCATAACAGACTTGTATGTCCATGTTGCTGTTGACAATGAACCAGCAAAGAAACTGTATACCAAGAGTGGTTTTATCTATGAAAGTGATGAACCTGCATGGCAGGCCAGGTTCCTAGACCGACCCCGAAGGCTTCTTCTATGGAAAGGCCTGGCAAGCAGCTAG 435 0.4552 MSHISSLSLSHDFSSACKFSVGGEDRVVVGTLDLNQCLSLPDEIAGTKPEVDEPDITRAYLSNVCVAEELHRNGLGYELLEKSKLVAHDWGITDLYVHVAVDNEPAKKLYTKSGFIYESDEPAWQARFLDRPRRLLLWKGLASS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120901g00016 144 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 28 126 IPR016181 -
Stsc120901g00016 144 FunFam uncharacterized protein LOC106768637 2 131 - -
Stsc120901g00016 144 Gene3D - 12 139 - -
Stsc120901g00016 144 Pfam Acetyltransferase (GNAT) family 15 115 IPR000182 GO:0016747
Stsc120901g00016 144 CDD NAT_SF 52 98 - -
Stsc120901g00016 144 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 142 IPR000182 GO:0016747
Stsc120901g00016 144 PANTHER OS08G0260000 PROTEIN 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120901g00016 Stsc-Chr120901 63223 65055 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc120901g00016 Acetyltransf_1 5.3e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120901g00016 - - vra:106768637 241.891