Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120900g00014 ATGTGTGATGAGTTCTCATCAATTGGAAAAGAAAGTTTGGGTCATAAGGTAGAACTTATTCAAGATCAGTTTGATAAGGATCTTCCTGAGAATGGTTCTAAGGATGAGAATAGTTCTAAAGATGCTCGTCTTCCTGATGCTGTCACTGGACAACCTGTTGTTGCAAACTTTGAGGAAGATAATATGGAAATTGACGAAAGCAAGACTGGAGAGTCATGGGTTGAAGGGCTTGCTGAGGGAGAATATTCTGATCTCAGCGTAGAGGAACGTTTAAATGCTCTTGTTATATTGGTTGGTGTGGCTAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGGTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAGTTCGACTAAAGGATGATAATGTAAATAAATCAGATTTTCCATCAATCAATGGGAATAAAGTTGAACCACAATACACAAGTCCTGCTGTTGGGGGGAACCAAAGCCCATTGCTTGACATTAATGTTGACAACAACAATAATATTAATGAGGCATCACCCAGCACTGCAGAAAATAAAAAAGCTGCGGCTGTACAGAACATTGCCATGGAAAAGCCCTTGTTTGGTCAAGATTTCTACCCTGGTCCAGATAACCCTCAGAGTCAGCTATCTGGTCCCTATTCAAAAAGGTCTCGTTCTCAGTTGAAATCATATATTTCTCACATGGCAGAAGAGATGTCCATATACCGATCTTTACCCCTTGGTCAAGATCGCCGACGTAATCGTTATTGGCAATTCGTTGCATCTGCTTCTTGCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATATCTTGATGGCAATTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGTTCTTTTTAATTCGCTTGATTTGCGTGGGATCAGAGAATCTCATTTGCGGATAATGTTGCAAAAGATTGGAAGTTCCTTCAAAGAAAATGTCAGGAAGAATGCACAATCTGCCAATATTGGAAGCAGAGGTGAAAATTCTATTAAAAATGAAGCTGATGAAACAGATTCCAGTCCTGATTGCCATGCCTTGTCTGACAGTCCCAGCAGTTCTCTCTGTGGCTTGAACTCTGATGCGTCTGAAACTTCATCATCATTCAAAATTGAGCTTGGGAAAAGTGAGAGTGAGAAGAAAGGTGCCTTGAGAAGGTATCAAGATTTCCAGAAATGGATGTGGAAAGAATGCTATAACTCATCCATATTATGTGCAATGAAATATGGGAAAATGAGATGTAAACCTCAGGTGGACATCTGTGATATCTGCCTCAACCCTTATTTCTTCGAAGACTCCCATTGCAATTGTTGCCATCATACTTTCCCCTCAAATAATGGATTTAATTTTCCAAAACATATATTTCAATGTGGGGGCAAGTTATCCAAAGATATTTGTATTCTAGATTCTTCTCTTCCCTTGCGGACAAGATTGCTTAAGGCCTTGCTGGCTTTTATTGAGGCATCTGTTCCATCTGAAGCATTTCAATCAACTTGGACAGAAGATACTAGAAGGCATTGGGGTGTGAAGCTAAGCAAATCATGTTCAGTCGAGGAACTTCTTCAGTTATTGACTTTGTTTGAGAGAGCAATAAAGCAAGATTTTTTATCATCATCCTTCTCAACAACACAAGAATTATTGGGATCAAGCAGTATGTCAGAGAGTGCTTTTACAGATACTGAATCTGTTGCTGTACTTCCATGGGTTCCACAGACCACCTCAGCTGTGGCTCTCAGACTGTCTGAGTTTGATGCATCCATTAGCTATGTTCCGGTTGAAAGGTCTGAGCATCGCAGGGAGAAAGAAGCTGCAGAATACATAAAGCTTCCTTCAAGATCTAATCCTTTCAAATCTAGTAGAGTGGTGGAACCAGCAGACTTGGACCGTGATGAATTCAGGAAATTTAGGTCTGCTCCCATGAAAATTGTACAAAGTGGCAATAAACGTGGGCAGGGGAACAGTGATAAAGGACGGGGTAAAAAGATGGCTAAAAGAATGCATGATTCCAAACAAGATACTGGCCGCCGTAGTGTTAAGGTCACCGAGAATCTTAGTCAAAGACTAAAACAACAGGGACAAGGAACACAAGGACAGAGTGGTGGACGGGGTCGCCGAACTGTCAGGAAAAGACGAGTGGAGAAGAGGACTGTTGAAGATTTGTTGCTGGGCCACAAGGCTGGCACGCACAGTTCCAATATTGGCAGAGAACCATTGAGAAACATGGATGAGGAATGGGATGATGGAAAGGCAAGTCCCATGACTCCCATCCACATGGGGGCTGCCGACACTAGTAACAGTGCCGAGGAGGCAGATTCTGATGACAACGCTCAAGTAGCAGAGTCGGATGAAAATGCTCAAGCAGCAGATTCGGATGACAATGCTGAAGAAGTGGATTCGGATGACAATCCTCTAGATGTGGACTCCGATGGCAATGGTCAAGCAGTGGAGTCTGATGACAATGGCCAAGCAGTGGAATATGATCAAGGAAACTGGGGAATAGGTTTCAATAACACCCCCAACAGATGGAGTAGGGATATGGTTGGAATGATGGATGAAGATGTAGAAGCTTCCGAAGAGGACAATGACAACAATGTTGGGATTGAAGAGAACGACGAAGAATCAGAGGGTGATGATGTTATGAGTGAGGAGGAGGGTTCAGATGGAATTGCAAATAGAGTTTTGAATGAAGACGACTCCGATTCGGACTCTGATGACTCTGAAGATTCATCTGATTAG 2781 0.4243 MCDEFSSIGKESLGHKVELIQDQFDKDLPENGSKDENSSKDARLPDAVTGQPVVANFEEDNMEIDESKTGESWVEGLAEGEYSDLSVEERLNALVILVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRLKDDNVNKSDFPSINGNKVEPQYTSPAVGGNQSPLLDINVDNNNNINEASPSTAENKKAAAVQNIAMEKPLFGQDFYPGPDNPQSQLSGPYSKRSRSQLKSYISHMAEEMSIYRSLPLGQDRRRNRYWQFVASASCNDPGSGRIFVEYLDGNWRLIDSEEAFDVLFNSLDLRGIRESHLRIMLQKIGSSFKENVRKNAQSANIGSRGENSIKNEADETDSSPDCHALSDSPSSSLCGLNSDASETSSSFKIELGKSESEKKGALRRYQDFQKWMWKECYNSSILCAMKYGKMRCKPQVDICDICLNPYFFEDSHCNCCHHTFPSNNGFNFPKHIFQCGGKLSKDICILDSSLPLRTRLLKALLAFIEASVPSEAFQSTWTEDTRRHWGVKLSKSCSVEELLQLLTLFERAIKQDFLSSSFSTTQELLGSSSMSESAFTDTESVAVLPWVPQTTSAVALRLSEFDASISYVPVERSEHRREKEAAEYIKLPSRSNPFKSSRVVEPADLDRDEFRKFRSAPMKIVQSGNKRGQGNSDKGRGKKMAKRMHDSKQDTGRRSVKVTENLSQRLKQQGQGTQGQSGGRGRRTVRKRRVEKRTVEDLLLGHKAGTHSSNIGREPLRNMDEEWDDGKASPMTPIHMGAADTSNSAEEADSDDNAQVAESDENAQAADSDDNAEEVDSDDNPLDVDSDGNGQAVESDDNGQAVEYDQGNWGIGFNNTPNRWSRDMVGMMDEDVEASEEDNDNNVGIEENDEESEGDDVMSEEEGSDGIANRVLNEDDSDSDSDDSEDSSD 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120900g00014 926 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 23 921 IPR044977 GO:0006357
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 800 820 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 651 926 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 867 899 - -
Stsc120900g00014 926 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 249 321 IPR028941 -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 20 42 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 751 765 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 333 374 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 208 227 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 20 49 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 359 374 - -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 668 692 - -
Stsc120900g00014 926 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 69 112 IPR028942 -
Stsc120900g00014 926 MobiDBLite consensus disorder prediction 693 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120900g00014 Stsc-Chr120900 132228 136331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120900g00014 64 855 Homeobox Transcription Factor Family AT1G28420 41.392 6.45e-147 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120900g00014 - - adu:107480767 1606.27