Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120898g00020 ATGGCGAAACACAACTTTCTTCTGTGCAGTGTGGTGATCGCCATAGCATCCATGCTTTCCATTTGTGATGCTAACAATAATGATGATGGTCCTAAACTTCATATTGTTTATTTGGGTTCATTACCTCAAACAACAAATTTTTATTCTCCGACCTCTCACCATCTCAATATGATGCAACAAGTTCTTAATGGAAGAAATCCAACAAAATCCTTAGTCCGCAGTTACAAAAGGAGTTTTAATGGTTTTGTTGCAATGCTCACGAATGAGCAAGCAGCAAAGCTAACCGAAATGGAAGGTGTTGTACAGCAAAATATAGAAAGCAATCTCGTTGTGGGAGTCATCGACACCGGAATTTGGCCTGAATCAGAAAGCTTCAGCGACGAAGATATCGACGACCCCGTTCCGAAAAAGTGGAAGGGTACTTGTGCAGGTGGCAAGAACCTTACGTGTAACAAGAAAATAATTGGAGCAAGATTCTACGTAGACGACTCTGCAAGAGATAGTCATGGCCACGGAAGTCACACAGCATCAATAGCAGCTGGAAACAATGTTGAGAATGTTGGCTTTTATGGCATTGCACAAGGCACAGCTAGGGGAGCCGTTCCTTCCGCAAGAATTGCGGCTTACAAAGTATGCGGCGCCGGTTTTTTTGGTTGTGGTGACCATGATATTTTAGCTGCATTTGATGACGCAATTGCTGACGGAGTTGACATCATTTCCATTTCAATTGGATCTATTCTCCGACGGAATCTGGAAAATGATTCTATTGCCATTGGTTCATTTCATGCAATGGCTAAAGGGATACTTGTAGTAAGCGCGGTTGGAAATTTAGGTCCTAAACTTGGCTCTTCAAATCGAACAAAAATTCCTATAGCTTTGAGCAATGGGGATTCAAATAAATGTCCAAAAGAAGAGGCTGATAAATGTGGCTGTTTTGATGAAATCTTGGTGAAAGGGAAGATAGTTTTATGTGACAATTATCCGAATATCAAGGACGGCGTGGGTGGTGTAATTGTAAAAGAAGGTGATACTTTTCTAAGAATCCCTTATTTGCCTTTACTGACATTGTCGGAAAAAGATTATGTATTTGTTAAATCCTACAGAAACTCAACAAAAGATCCAAGAGCTCAGATACTCAAGAGTGAGATCACTAGAAATGATAATGCTCCTAAAGTGGCAGCATTTTCCTCCCGTGGACCAAACCCTATAATTACAGAGATCTTGAAACCGGATGTAAGTGCCCCAGGAGTTGACATATTGGCTGCTTATTCCCCGATTTCTTCACCAACAGGATTTCCTGATGAAAGTGATAATAGATCTGTGAATTACGATATTTTAAGTGGGACTTCAATGGCTTGTCCTCATGTTCCTGGAATAGCCACATATGTTAAAAGCTTTCACCCTGATTGGTCACCTACGGCAATTAAATCTGCTATTTTAACGACAGCAAAACCCATGGTTAGCAACTCGGTGCATGATGTGGGAGAATATGCATATGGATCTGGACAAGCCAATCCAATTCTAGCAATCAACCCTGGACTTGTTTACGACATTAACAAGGGAGATTATGTACAAATGTTGTGCAACTTAGGGTATGATAATGGAAAAATTAAATTGATAACGGGAGAGATGAATCCATGCAAGGGAGTTGCAGATAGAACGTTGGTAACAAGTTTAAATTATCCAAGTTTTGTAGCGCAGGTTCGGCCCAAGGTGCCTTTTAATATGAGTTTTAGTAGAACAGTTACAAATGTTGGTTTAGCCAACTCAAGTTATGGAGTAACAATCACACCGATTCCGGAAGTTAATATCACGGTGACACCAAGTGTTTTGTCCTTCAAAGCATTGGATGAGAAAAAATCCTTTGCACTGAATGTCATTGGTAGGATACCGAGAACAACTGTGATTACCTCATCAATAATATGGTTAGATGGGAGTCATCATGTTAGAAGTCCAATTGTTATAGATGTTTCATGA 1977 0.4021 MAKHNFLLCSVVIAIASMLSICDANNNDDGPKLHIVYLGSLPQTTNFYSPTSHHLNMMQQVLNGRNPTKSLVRSYKRSFNGFVAMLTNEQAAKLTEMEGVVQQNIESNLVVGVIDTGIWPESESFSDEDIDDPVPKKWKGTCAGGKNLTCNKKIIGARFYVDDSARDSHGHGSHTASIAAGNNVENVGFYGIAQGTARGAVPSARIAAYKVCGAGFFGCGDHDILAAFDDAIADGVDIISISIGSILRRNLENDSIAIGSFHAMAKGILVVSAVGNLGPKLGSSNRTKIPIALSNGDSNKCPKEEADKCGCFDEILVKGKIVLCDNYPNIKDGVGGVIVKEGDTFLRIPYLPLLTLSEKDYVFVKSYRNSTKDPRAQILKSEITRNDNAPKVAAFSSRGPNPIITEILKPDVSAPGVDILAAYSPISSPTGFPDESDNRSVNYDILSGTSMACPHVPGIATYVKSFHPDWSPTAIKSAILTTAKPMVSNSVHDVGEYAYGSGQANPILAINPGLVYDINKGDYVQMLCNLGYDNGKIKLITGEMNPCKGVADRTLVTSLNYPSFVAQVRPKVPFNMSFSRTVTNVGLANSSYGVTITPIPEVNITVTPSVLSFKALDEKKSFALNVIGRIPRTTVITSSIIWLDGSHHVRSPIVIDVS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120898g00020 658 SUPERFAMILY Subtilisin-like 101 511 IPR036852 GO:0004252|GO:0006508
Stsc120898g00020 658 Gene3D Peptidase S8/S53 domain 353 512 IPR036852 GO:0004252|GO:0006508
Stsc120898g00020 658 Pfam Fibronectin type-III domain 559 655 IPR041469 -
Stsc120898g00020 658 PRINTS Subtilisin serine protease family (S8) signature 167 180 IPR015500 -
Stsc120898g00020 658 PRINTS Subtilisin serine protease family (S8) signature 447 463 IPR015500 -
Stsc120898g00020 658 PRINTS Subtilisin serine protease family (S8) signature 106 125 IPR015500 -
Stsc120898g00020 658 ProSiteProfiles Serine proteases, subtilase domain profile. 80 510 - -
Stsc120898g00020 658 Pfam Peptidase inhibitor I9 34 101 IPR010259 -
Stsc120898g00020 658 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 63 654 IPR045051 -
Stsc120898g00020 658 Pfam Subtilase family 107 488 IPR000209 GO:0006508|GO:0008236
Stsc120898g00020 658 Gene3D - 527 657 - -
Stsc120898g00020 658 CDD Peptidases_S8_3 104 483 IPR034197 -
Stsc120898g00020 658 Gene3D Peptidase S8/S53 domain 109 293 IPR036852 GO:0004252|GO:0006508
Stsc120898g00020 658 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120898g00020 Stsc-Chr120898 124230 126397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120898g00020 5 655 Subtilisin-like Serine Gene Family AT3G46850 44.205 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120898g00020 - - psat:127076787 610.142