Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120894g00008 ATGGTGAGCATCCAATCTTCCTACACAGTCACCCCTTCAGAGCCCACACCCGATGTGAGACTCTTCTCCCTCTGCGAGCAAATCAAGCTTCGCACCCACGCTCCCTCCTTCTACGCCTACAACCCCACTAACTTGGACAAAATCAACATCCACAACCTCAGAGACGCTCTCAGCAAGGCCCTCTCCATCTACTACCCTATCGCCGGCAGGCTCTGCTGGACGCAGGGTGGTAGATGGGAGATCCATTGCAACGCCAAAGGAGCCTTGCTAATTGAAGCTTCCTGCAAAGGGAAGACATTAGACGATCTTGGAGACTTTGTCCCCAACGGTTTGGTCACTCAACTCATTCCCAACATCGATTACACCGCTCCGCTTGAACAAACCCCGATCTTAGCGGTTCAGCTCACCCGCTTCAGCTGTGGCGGCGTCACCGTCGGCGTTGCCATGTGCCGCGGCGTACTCGACGGAACCGCCGGCATGCGGTTCATCAACACTTGGGCAAAGTTGGCCCGAGGGGAGCCTCTAGACGAATCTGACCAGTATCCTTGTCACGATCGTACGGAGCTAAACTCCCGTAAGACCACGACGAAGGGTTCGGAGTTCCATACTCATGACCATGGCCATGGTCCTGACCATGACCATGCAGAATATGGAACCCCGCCCCCTTGGTTAGGTTCATTGGGAACCGAAGACGCCAAGGTGGCTGTGGAAGTCATGAAGCTAACGGGAGAGCAAGTCAAGAAACTGAAAATGAAAGCGACGTCTACAATCGTCACGTCCGTCGATAACGGTAACTGTGAAGTTATCAAACCGTTCTCGAGTTTCGAGTCTATTGCCGGACACTTATGGCGGTCTGTTAGTAAAGCAAGATACCAAGGAAACAATGCACAGCCAACGAGGCTAACCACTTTGGTTAACTGCAGGAACCGTCTGAAGCCGCCGCTTCCCCCGGTCTACGCGGGAAACGCGGCTTTCCCCACCACGACGCCCACCATTACCTTTGGTGACCTGATGGAGAATCCCGTGGGATTTGCGGCCGCCAAGGTAAAGGGGGCGACCGCGAAGGTGGACGACGCGTTCGTCAGATCGGCGCTTGAATACATCGATAATGTGGAAGACATGAACTTGGTGAGGTACAATTTTCACTACCCAGCCAAGAGTGTTCATAAGGGGGCTTGGAAAGGGAACCCAAACTTGTTCGTAGTGAGTTGGATGAACTTCACATATGACCATGCTGATTTCGGTTGGGGTGTGCCTTATTATTTTGGACCTGTGTATATGGATGCTGAAGGGAAAGCGTTTTGTCTTAACAAGCCTAATGGTGATGGAACGGTTCATGTGGCTATCTCTTTGGACTCAGCTCACATGCCTGCTTTCAAGAAAATCTTCTATGAGGACATAGATTAG 1407 0.5224 MVSIQSSYTVTPSEPTPDVRLFSLCEQIKLRTHAPSFYAYNPTNLDKINIHNLRDALSKALSIYYPIAGRLCWTQGGRWEIHCNAKGALLIEASCKGKTLDDLGDFVPNGLVTQLIPNIDYTAPLEQTPILAVQLTRFSCGGVTVGVAMCRGVLDGTAGMRFINTWAKLARGEPLDESDQYPCHDRTELNSRKTTTKGSEFHTHDHGHGPDHDHAEYGTPPPWLGSLGTEDAKVAVEVMKLTGEQVKKLKMKATSTIVTSVDNGNCEVIKPFSSFESIAGHLWRSVSKARYQGNNAQPTRLTTLVNCRNRLKPPLPPVYAGNAAFPTTTPTITFGDLMENPVGFAAAKVKGATAKVDDAFVRSALEYIDNVEDMNLVRYNFHYPAKSVHKGAWKGNPNLFVVSWMNFTYDHADFGWGVPYYFGPVYMDAEGKAFCLNKPNGDGTVHVAISLDSAHMPAFKKIFYEDID 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120894g00008 468 Gene3D - 1 206 IPR023213 -
Stsc120894g00008 468 MobiDBLite consensus disorder prediction 175 224 - -
Stsc120894g00008 468 Gene3D - 228 466 IPR023213 -
Stsc120894g00008 468 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 463 - -
Stsc120894g00008 468 MobiDBLite consensus disorder prediction 175 215 - -
Stsc120894g00008 468 Pfam Transferase family 1 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120894g00008 Stsc-Chr120894 93556 95319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120894g00008 2 465 Monolignol Biosynthesis Gene Families AT5G48930 37.447 1.98e-87 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120894g00008 K13065 - gmx:100775549 558.91