Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120893g00026 ATGGAGTTCCAATATTCTCCCTCCTTATTGCTGATCATCACCCCATTCCTGTTGCTGCTGCTTATTTTGGTGTCAATGAAATATAGAAAAAAATTGAATGCAAGGAGTGAGGCAAAAAAGGTGCCACCAGGGCCATGGAAGTTGCCTTTAATAGGGAACCTTCATCAACTAGCAGTAGCAGGAGCATCCTCACTTCCACATCATGTTCTTAGAGATCTATCACTCAAATATGGAGCTCTCATGCACCTTCAACTCGGTGAAATCTCTACAGTGGTTGTCTCATCCCCTGACATGGCCAAGCAAATAATGAACACACATGATCTTGCTTTTTCCCAGAGGCCACAACTCCTTACTCCCAAGATTCTAGCCTATGATTCAACCGACATTGCTTTCGCTCCCTACGGCCATTACTGGAGACAGATGAGGAAGATATGCACTTTGGAGCTTCTAAGCACCAAGAGGGTTCAGTCTTTCTCCTCCATACGACAACATGAGGTTACTAAGCTCATTCAATCAATTCAGCAGTCTTCTTCACCGATCAATATTTCTGCATTGCTTTTCTCATTGGTGATTACCTTAGTTTCAAGGGAAGCTTTCGGTATAAAGTCTGAGCATGAAGATGAACTACTATCTTTGGTAAAAAAGGCATCTGAAACAATGGGAGGTTTTGACCTTGCTGATTTGTTCCCTTCACTTAAACATATTCATCTCATAACTGGGATGAAGGCTAAATTGGAAGATATGCATAAGAAGCTGGACAATATCCTAGACAAGATTGTGAAGGAGCATCAAGAAAATATCAGCCATGACCACAAAGGGGAAGAAAATCTTATCGATGTTCTGTTGCGCCTGCAGCAGAGCAGTAACCTCGAGGTTCCAATCACAGTTAATAATATCAAGGCCGTCATATGGGACATATTTGGTGGTGGGACTGATACTTCAGCAACAGTTCTAGAGTGGACTATGTCAGAGCTAATGAAGAACCCAAGAGTGATGGAGAAAGCACAGAATGAAATAAGAGAGGCAATTAAGGGGAAGGAAACAATAAAGGAGAGTGATTTACATAAGCTTAGTTACTTAAAGGCAGTGATAAAAGAAAGCATGAGATTGCATCCACCTGCTCCATTACTGCTCCCAAGGGAATGCAGGGAAGCATGCAAGATAGGTGGATATGATATAGCAGTAAAGAGCAAAGTGATAGTAAATGCATGGGCAATTGGAAGGGATCCCAATCGTTGGTACAATGCTGATAGCTTCATGCCTGAGAGGTTTAATAATAATAATAATAATAATGGCATTGGCACTAGAGGGAATGACTTTGAGTACATTCCATTTGGGGCAGGAAGGAGAATGTGCCCTGGAATTTCACTTGGCTTGGCTAATGTTGAGCTTCCTCTTGCTGCTTTGCTCTATCACTTTGATTGGAAACTCCCAAATGGAATCCAGCCACAGGATTTGGATATCACTGAAGCCTTTGGAGCTGCCGTGCAAATTGAACGCGTTACACCACCAAATCAAATCGAGGCGAACTCCAATCTTCCCCAACCTGAGCAGAATTTCATCAAGCTCAATAGGATAACTACGAAGAAGGTGGGGCACAAACCCACCACAAAAGAGAAAGGGAAATCAAAGGACAAAGCAACTCCAGCAATAAAAGCAAAAGGGACAACCATCCACAGATCTTCAGCTGCATTGCAAAGCCCATACGTTCAAGTGACAACGGAAGAATTGAACAAGCTTAAATGA 1746 0.4244 MEFQYSPSLLLIITPFLLLLLILVSMKYRKKLNARSEAKKVPPGPWKLPLIGNLHQLAVAGASSLPHHVLRDLSLKYGALMHLQLGEISTVVVSSPDMAKQIMNTHDLAFSQRPQLLTPKILAYDSTDIAFAPYGHYWRQMRKICTLELLSTKRVQSFSSIRQHEVTKLIQSIQQSSSPINISALLFSLVITLVSREAFGIKSEHEDELLSLVKKASETMGGFDLADLFPSLKHIHLITGMKAKLEDMHKKLDNILDKIVKEHQENISHDHKGEENLIDVLLRLQQSSNLEVPITVNNIKAVIWDIFGGGTDTSATVLEWTMSELMKNPRVMEKAQNEIREAIKGKETIKESDLHKLSYLKAVIKESMRLHPPAPLLLPRECREACKIGGYDIAVKSKVIVNAWAIGRDPNRWYNADSFMPERFNNNNNNNGIGTRGNDFEYIPFGAGRRMCPGISLGLANVELPLAALLYHFDWKLPNGIQPQDLDITEAFGAAVQIERVTPPNQIEANSNLPQPEQNFIKLNRITTKKVGHKPTTKEKGKSKDKATPAIKAKGTTIHRSSAALQSPYVQVTTEELNKLK 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120893g00026 581 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PANTHER OS08G0105600 PROTEIN 68 497 - -
Stsc120893g00026 581 CDD CYP71-like 76 496 - -
Stsc120893g00026 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc120893g00026 581 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 Coils Coil 242 262 - -
Stsc120893g00026 581 Pfam Cytochrome P450 42 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 MobiDBLite consensus disorder prediction 532 549 - -
Stsc120893g00026 581 MobiDBLite consensus disorder prediction 530 558 - -
Stsc120893g00026 581 Gene3D Cytochrome P450 34 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00026 581 FunFam Cytochrome P450 71D8 34 501 - -
Stsc120893g00026 581 Coils Coil 332 352 - -
Stsc120893g00026 581 SUPERFAMILY Cytochrome P450 42 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120893g00026 Stsc-Chr120893 117311 121416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120893g00026 13 496 Cytochrome P450 AT3G26310 42.510 1.77e-137 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120893g00026 - K15472 gmx:100794503 680.248