Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120893g00020 ATGGAAGAAGTTAATTCATCCTTGGTGTTTATCATCATAAGCTTCTTCTTCCTCATCTCTGTGCTATTGTTATGGATTGCAAACAAGGGTAAGAGTATCCATAAATTGCCACCTGGGCCATTGAAACTACCTCTCATAGGGAACCTCCATCAACTTGCAGGCTCAACACTTCCACACCAGGCTCTCAGAAAACTATCAAACAAACACGGCCCACTCATGCACCTTCAACTTGGTCAGATTTCATCAGTGATTGTCTCATCCCCCAACATGGCCAGAGAAATCATGAAGACGCATGATCTTACTTTTGCTGATAGGCCCGAGTTCCTTCCTTCCAAGATCATAGCCTATGATTCAGCAGACATTGCATTCGCTCCCTATGGTGAATTCTGGAGGCAGATGAGGAAGATATCCACACTTGAGCTTCTAAGTTCAAAGAAGGTTCACTCTTTCTCCTATATCCGACAAGAGGAGGTAGCTAACATGTTAGAAACAATTCGCGGATCCGCAGGTGCAACCATCAATCTCAGTAAAATCATTAACAATCTCATAAGCATTGTGATTTCTAGAGCTGCATTTGGCAACTTATCTGAAGATCATGAACAGTTTGTGTCCTATGTGAAGGAGACAATAGCTCTAGCCGATGGATTTGCCCTTGCGGATGTGTTTCCTTCTTTGAAACCTCTGCATTTCATCACTGGTTTTGAAGACAAACTGAAGAAGATGCATGTCAAGATCGACAAGATCTTAGACAAGATCATACAGGAGAATGAAGCAAAGAAATTGGAAGATACAGAGCAACGGCAGGAAAAGAAGAACGAGAATCTTGTTGAGGTTCTTTTAAGAGTCCAACATAGTGGCACCCTTGACACACAAATTACAATGAACAATGTCAAAGCAGTCATTTGGAACATATTTGCTGGTGGAACAGACACTTCAGGAGTAGTTATAGAGTGGGTTATGTCGGAATTGATGAGGAGCCCCAGAGCTATGAAGAACGCACAGGCCGAGATTCGACATGCTTTGAGAGGAAAGCAAACAATCAGGGAGGCAGATGTATCAGAACTTCCCTACTTGAAGGCTGTGATCAGCGAAACAATGAGGTTACACCCTCCTCTTCCTCTGTTGCTTCCAAGACAAGCCAGACAAGACTGCACCATCGGTGGATACCATATACCCGTCAATACTAAAGTCATGGTAAATGCGTACGCGCTGGGAAGAGATCCTGATTACTGGTATGATGTAGAAACCTTCCTACCAGAAAGGTTTGTGGACACTCCTATGGATTTCAAAGGGACAAACTTGGAGTACATTCCCTTTGGAGCAGGAAGGAGAATTTGTCCGGGAATTAACTTCGGTTTAGCCAACGTTGAGTTTGCTCTAGGTATGCTACTCTACCACTTCAACTGGGAACTCCCTAATGGAATTAAGCCAGAGGATTTGGATATGGAGGAAGCACAAGGAGCTGTGGTTGGAAGGAAAAACAACCTTTACTTGATTCCCACACCTTACCATTCTTAG 1518 0.4348 MEEVNSSLVFIIISFFFLISVLLLWIANKGKSIHKLPPGPLKLPLIGNLHQLAGSTLPHQALRKLSNKHGPLMHLQLGQISSVIVSSPNMAREIMKTHDLTFADRPEFLPSKIIAYDSADIAFAPYGEFWRQMRKISTLELLSSKKVHSFSYIRQEEVANMLETIRGSAGATINLSKIINNLISIVISRAAFGNLSEDHEQFVSYVKETIALADGFALADVFPSLKPLHFITGFEDKLKKMHVKIDKILDKIIQENEAKKLEDTEQRQEKKNENLVEVLLRVQHSGTLDTQITMNNVKAVIWNIFAGGTDTSGVVIEWVMSELMRSPRAMKNAQAEIRHALRGKQTIREADVSELPYLKAVISETMRLHPPLPLLLPRQARQDCTIGGYHIPVNTKVMVNAYALGRDPDYWYDVETFLPERFVDTPMDFKGTNLEYIPFGAGRRICPGINFGLANVEFALGMLLYHFNWELPNGIKPEDLDMEEAQGAVVGRKNNLYLIPTPYHS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120893g00020 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Stsc120893g00020 505 Gene3D Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 CDD CYP71-like 68 496 - -
Stsc120893g00020 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120893g00020 505 PANTHER OS08G0105600 PROTEIN 61 504 - -
Stsc120893g00020 505 Coils Coil 251 281 - -
Stsc120893g00020 505 FunFam Cytochrome P450 99A2 26 501 - -
Stsc120893g00020 505 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120893g00020 Stsc-Chr120893 82313 84017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120893g00020 12 503 Cytochrome P450 AT3G26300 40.438 1.48e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120893g00020 - K15472 gmx:100800554 624.009