Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120892g00024 ATGTGCAGAGGTCCACAAGGAAAAGGGCATGGCTCAGCAAGAGGAATAGGAATATCTTCTTCTTCTTCTTCTTCTTCAACATGCTGTTGTGAGTTATGTGGATTAAGGGCTTCATTGTATTGCCATGCTGATGATGCATATCTATGTAGAAAATGTGACAAATGGGTTCATGAAGCAAATTTCTTGGCCCTTAGGCACATTAGGTGCTTTCTCTGCAACACATGCAGCAATCTCACAAGAAGATGTGTTATTGGTGCTTCATCTGAGGTTATTCTTCCTGCTAATGTAAGTTGGGCCAATGGAAACCTTCCTAACAACAGCACCAACACAACAACATGTTCAAGAATGCATGGTAACCATGATGATGATGGTGATGTTGATGTTGGCCTTTCCCTGTCTCTTTGA 405 0.4173 MCRGPQGKGHGSARGIGISSSSSSSSTCCCELCGLRASLYCHADDAYLCRKCDKWVHEANFLALRHIRCFLCNTCSNLTRRCVIGASSEVILPANVSWANGNLPNNSTNTTTCSRMHGNHDDDGDVDVGLSLSL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120892g00024 134 CDD Bbox1_BBX-like 29 71 - -
Stsc120892g00024 134 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 29 82 - -
Stsc120892g00024 134 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120892g00024 Stsc-Chr120892 137267 137671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120892g00024 1 109 C2C2-CO-like Transcription Factor Family AT3G21890 44.144 1.93e-24 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120892g00024 - - aip:107610340 221.861