Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120892g00017 ATGGCAAGGCAATTAGGGTACTTGAGAGTTTTGGTTGTTTGTGTGGTGGCATCAATTATTGCAACAACACAAGCTCAGTTGCAGCTTGGTTTCTATGCTAATAGCTGCCCAAATGCTGAGAAAATTGTTTCTGAGTTTGTGAATGAGCACATCCACAATGCTCCTTCACTTGCAGCTGCATTGATAAGAATGCATTTTCATGATTGTTTTGTCAGGGGGTGTGATGGATCAGTGCTTCTGAACAAAACAAACAACCAAGCTGAGAAGAATGCTCCACCAAACTTGACAGTGAGAGGCTTTGACTTCATTGAGAGAATAAAGAGCCTTGTTGAAGCTGCATGCCCTGGTGTTGTTTCTTGTGCTGATATCTTAACTTTGGCTGCCAGAGACTCCATTGTTGCCACTGGTGGTCCCTCATGGCAAGTTCCAACAGGTAGAAGGGATGGTTTAGTCTCTAATTTGTCAGAAGCCTCAAGCAACATTCCATCACCATTTGACAACTTCACCACCCTGCAAACTAAGTTTAACAGAGTTGGACTTGATCTCAATGACTTAGTCATCTTATCTGGTGCACACACAATTGGTGTTTCTCACTGCTCATCAGTCAGAAACCGTTTGTACAACTTCACTGGGAAGCTGGATCAAGACCCTGCACTAGACAGTGAGTATGCACAAAACCTGAAGAAATTCAAGTGCAAGAGCATCAATGACAGCACCACTTTGATTGAGATGGACCCTGGTAGCCGCAAGACCTTTGATCTTGGTTACTATAACCAAGTTGTTAAGAGAAGAGGCCTATTCACCTCAGATTCACAGTTGTTGGCCAACAGTGTTACAAAGTCTCTGGTGAACCAATTGCTTCAAGGCTCACTTCAGAATTTCTATGCTCAGTTTGCAAAGTCTATGGAGAAAATGGGAAGAATTAATGTCAAGACAGGGACACAAGGTGAAATCAGGAAGCAATGTGCATTGGTAAATAGCTAA 984 0.4278 MARQLGYLRVLVVCVVASIIATTQAQLQLGFYANSCPNAEKIVSEFVNEHIHNAPSLAAALIRMHFHDCFVRGCDGSVLLNKTNNQAEKNAPPNLTVRGFDFIERIKSLVEAACPGVVSCADILTLAARDSIVATGGPSWQVPTGRRDGLVSNLSEASSNIPSPFDNFTTLQTKFNRVGLDLNDLVILSGAHTIGVSHCSSVRNRLYNFTGKLDQDPALDSEYAQNLKKFKCKSINDSTTLIEMDPGSRKTFDLGYYNQVVKRRGLFTSDSQLLANSVTKSLVNQLLQGSLQNFYAQFAKSMEKMGRINVKTGTQGEIRKQCALVNS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120892g00017 327 PANTHER PEROXIDASE 25-RELATED 16 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 Pfam Peroxidase 43 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Stsc120892g00017 327 FunFam Peroxidase 30 173 - -
Stsc120892g00017 327 Gene3D Peroxidase, domain 2 162 305 - -
Stsc120892g00017 327 Gene3D - 30 326 - -
Stsc120892g00017 327 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120892g00017 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Stsc120892g00017 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Stsc120892g00017 327 FunFam Peroxidase 162 305 - -
Stsc120892g00017 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120892g00017 Stsc-Chr120892 104821 106836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120892g00017 19 327 Peroxidase AT1G05260 68.932 1.17e-164 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120892g00017 K00430 - gmx:102660930 503.442