Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120892g00013 ATGTCTGAATTTGACACAAACATTTCATCTGCTTTTGATCCGTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCGGGGGCGAAAGATTATGTTCATATACGGGTGCAACAAAGAAACGGGAGGAAAAGCCTTACAACAGTTCAAGGATTGAAGAAAGAATTCAGTTACTCCAAGATTCTTAAGGACCTTAAGAAAGAGTTCTGCTGTAATGGTACTGTTGTCCAAGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGTGATCAAAGAAAAAATGTTTCTACCTTCCTTGTGCAGGCTGGCATAGTCAAGAAGGATAATATCAAGATTCATGGATTCTAA 342 0.4152 MSEFDTNISSAFDPFAEANAEDSGAGAKDYVHIRVQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120892g00013 113 SUPERFAMILY eIF1-like 10 113 IPR036877 GO:0003743|GO:0006413
Stsc120892g00013 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Stsc120892g00013 113 NCBIfam translation initiation factor SUI1 9 113 IPR005874 GO:0003743
Stsc120892g00013 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
Stsc120892g00013 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Stsc120892g00013 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Stsc120892g00013 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Stsc120892g00013 113 Gene3D - 1 113 - -
Stsc120892g00013 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120892g00013 Stsc-Chr120892 89516 89939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120892g00013 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.496 6.22e-74 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120892g00013 K03113 - qsa:O6P43_000848 216.468