Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120890g00020 ATGGCGATGATGGAAATGAGAAATAAGAGGGTGGTGGAAGATGTTGTAATAATGGGAGGGTTGATCGGAGTCCAATTTATCTACGCAGGGAACGCTTTGCTGATGAGTTATGCTATGTCATTAGGCCTCACCTCTCTTACACTAGTTATTTTTACTTCCCTAGCTACCTTCTTTGTTCTCTTTCCCGTTGCCTTTTATTTTGAAAGGACTAAGTGGCCCAAGGATTGCAAACTCAAGCTGATTATGCAACTCTTGTTTCTTTCGTTTGGAGGACTAGCTTTCCAGTGTCTGTTCCTCAAAGGAATCAATCTAACTTCACCAGCAATGGGAACAGCGATGCCAAACCTTGCACCAGGTCTTATCTTCCTCATCGCGTGGACTTTTGGGTTGGAGGAAGTGAATTTAAGGAACACACACAGCAAAGTAAAAATCTTAGGGACACTGCTCTGTGTTCTTGGGGCTCTCACAATGAGCATAATGCAAAGCATTTCTGCTCCTCCAGAAACCGGTTTCGAGGCTACAGTTCATTTATCATCGACGCCATCAGAGTTCGTCTTTGACAAGCACAAGATCATTGGCAGCCTCTATCTCTTGGCCGCAGTCCTCATTCTGTCTAGCAGTGTAGTCCTGCAGGCTTTTGTTCTTGGAGATTTTGCAGCACCTATGTCCTTGGGTGCAATAACGTCCTTGTTAGGGGCATTCATGACCGCAGTTGTTCAGTTACTTACAGAGCACCAAGTGAAAATTGATTGGCAAGTTCTGCGTTTTAGAGACCTAATTGGCTATTCTCTTCTGGCAGGTGCAGCTAGTGGAATATGTTTAGGCTTCAATGGTTGGGCACTTAAGAAGAAAGGACCAGTCTTGGTCTCTATGTTTAGCCCCATTGCTACAGTCTGCTCTGTCATTTTCTCCTTTGTTACCTTGGGAGACACCATTAATTTTGGAAGCGTTGCAGGTATGTTACTCATGTTCACTGCCCTGTACTTAGTCCTTTGGGCCAAAGACAAAGAAGGCCACGCAAAAGGGAATAATGGCATAGAGATTGAGAAGGCTTTTTTAAGCTGA 1065 0.4432 MAMMEMRNKRVVEDVVIMGGLIGVQFIYAGNALLMSYAMSLGLTSLTLVIFTSLATFFVLFPVAFYFERTKWPKDCKLKLIMQLLFLSFGGLAFQCLFLKGINLTSPAMGTAMPNLAPGLIFLIAWTFGLEEVNLRNTHSKVKILGTLLCVLGALTMSIMQSISAPPETGFEATVHLSSTPSEFVFDKHKIIGSLYLLAAVLILSSSVVLQAFVLGDFAAPMSLGAITSLLGAFMTAVVQLLTEHQVKIDWQVLRFRDLIGYSLLAGAASGICLGFNGWALKKKGPVLVSMFSPIATVCSVIFSFVTLGDTINFGSVAGMLLMFTALYLVLWAKDKEGHAKGNNGIEIEKAFLS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120890g00020 354 PANTHER WAT1-RELATED PROTEIN 20 338 IPR030184 GO:0016020|GO:0022857
Stsc120890g00020 354 Pfam EamA-like transporter family 22 158 IPR000620 GO:0016020
Stsc120890g00020 354 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
Stsc120890g00020 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120890g00020 Stsc-Chr120890 107774 109786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120890g00020 1 341 Nodulin-like Gene Family AT5G47470 56.395 5.25e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120890g00020 - - aprc:113870214 477.633