Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120888g00003 ATGGCAGATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACTATGAGGGTGGTATGGACCCTTAAGTTGAAGGGTATATCATATGAGAACATTGAGGAAGATCGCTACAATAAGAGTCCTCAACTTCTTGAATACAACCCTGTGCATAAGAAGACCCCAGTGCTTGTCCATGGTGGAAAACCCATATGTGAGTCCATGGTAATTGTTGAATACATTGATGAGTTATGGCCACAGAATCCGTTGCTCCCTCATGATTCCTATGAAAGAGCTCAAGCAAGGTTTTGGGTTGCATATGCTGAACAAATGGTTCCTGTAATACCAGCACTCATCTTTAGTACTAATGCTGAAGAGAAAGGAAAGGCCTTAGAGAAATTATGGGAACATCTCAAAGTCCTTGAAGATCATTGCTTAGCTGATAAGAGGAAATTCTTTGGTGGGGACAAACTTAACATTGTGGACATAGCTTTTGGATCGCTTGTCACACTTTTTATTACTATAGGAGATGTTAAACAAGAGGAGATCCTAGTAGCTGAAAAGTTCCCTCTCCTGCATGTGTGGTTTGATAATTTCAAGAATGCCCCAGTCATCAAAGAAAACTTCCCTGATAGAGAGAAAATGTTGGCTACTATAAAGGCTATCATGGAGAAGGATCTCATGGAGATGAGGTTGGCATCTTCCTAA 684 0.4035 MADLKLHGFWYSPFTMRVVWTLKLKGISYENIEEDRYNKSPQLLEYNPVHKKTPVLVHGGKPICESMVIVEYIDELWPQNPLLPHDSYERAQARFWVAYAEQMVPVIPALIFSTNAEEKGKALEKLWEHLKVLEDHCLADKRKFFGGDKLNIVDIAFGSLVTLFITIGDVKQEEILVAEKFPLLHVWFDNFKNAPVIKENFPDREKMLATIKAIMEKDLMEMRLASS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120888g00003 227 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Stsc120888g00003 227 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Stsc120888g00003 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Stsc120888g00003 227 CDD GST_N_Tau 4 77 - -
Stsc120888g00003 227 Gene3D - 86 221 - -
Stsc120888g00003 227 SFLD Main (cytGST) 1 217 - -
Stsc120888g00003 227 CDD GST_C_Tau 88 214 IPR045074 GO:0004364|GO:0006749
Stsc120888g00003 227 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Stsc120888g00003 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Stsc120888g00003 227 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Stsc120888g00003 227 Gene3D Glutaredoxin 1 85 - -
Stsc120888g00003 227 Pfam Glutathione S-transferase, C-terminal domain 105 194 IPR004046 -
Stsc120888g00003 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 208 IPR045073 -
Stsc120888g00003 227 FunFam Glutathione S-transferase GSTU6 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120888g00003 Stsc-Chr120888 10769 15007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120888g00003 3 217 Glutathione S-transferase Gene Family AT2G29420 40.930 1.76e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120888g00003 K00799 - gmx:547584 298.13