Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120888g00002 ATGGAAGATTTGAAGTTACATGGATTTTGGGTCAGCCCTTTTACTATGAGGGTGGTATGGACCCTAAAGCTGAAGGGTATAGAATATGAGAACATAGAGGAGAACCCACTCAACAAGAGTCCTGAACTTCTTGAATACAACCCTGTGTATAAGAAGGCTCCGGTGCTTGTTCATGCTGGAAAACCCATATGTGAATCCATGATCATTGTTGAATACCTAGATGAGAAATTGCCACATAATTCATTGGTTCCACATGATCCCTATGAGAAAGCTCAAGCAAGGTTTTGGGTTACCTATGCTGATCAAATGGTTCCTGCATTATTTGCGGCACTCTACTTCAACTCTGGTACTGGTGAAATAGAGAAGATATGGGAGCATCTCAAAGTTTTTGAAGATCAATGCTTAGGTGATGAGAGAAAATTCTTTGGTGGGGACACTATTAATATTGTGGACATCGCTCTTGGATCAATTTTCAATGTTCTATTCACTATAGAAGATGTGAATGAAGTGAAGGTCATAGAAGCTGAGAAGTTCCCTCTCTTGCATTCATGGTTTAATAATTTCAAGAATGCCCCAGTGATCAAAGAAAACTTCCCTGATAGGGAGAAACTGTCAGCTACTATAAAATCTATCATAGCTAAGGTGTCGGGATCTTCCTGA 660 0.3985 MEDLKLHGFWVSPFTMRVVWTLKLKGIEYENIEENPLNKSPELLEYNPVYKKAPVLVHAGKPICESMIIVEYLDEKLPHNSLVPHDPYEKAQARFWVTYADQMVPALFAALYFNSGTGEIEKIWEHLKVFEDQCLGDERKFFGGDTINIVDIALGSIFNVLFTIEDVNEVKVIEAEKFPLLHSWFNNFKNAPVIKENFPDREKLSATIKSIIAKVSGSS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120888g00002 219 Gene3D - 83 218 - -
Stsc120888g00002 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Stsc120888g00002 219 FunFam Glutathione S-transferase GSTU6 1 84 - -
Stsc120888g00002 219 Pfam Glutathione S-transferase, C-terminal domain 122 191 IPR004046 -
Stsc120888g00002 219 SUPERFAMILY GST C-terminal domain-like 75 212 IPR036282 -
Stsc120888g00002 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 204 IPR045073 -
Stsc120888g00002 219 SFLD Main.3: Omega- and Tau-like 1 215 IPR045073 -
Stsc120888g00002 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 207 IPR010987 -
Stsc120888g00002 219 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Stsc120888g00002 219 SFLD Glutathione Transferase (cytosolic) 1 215 IPR040079 -
Stsc120888g00002 219 Gene3D Glutaredoxin 1 82 - -
Stsc120888g00002 219 CDD GST_N_Tau 4 75 - -
Stsc120888g00002 219 CDD GST_C_Tau 87 209 IPR045074 GO:0004364|GO:0006749
Stsc120888g00002 219 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120888g00002 Stsc-Chr120888 7630 8374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120888g00002 2 218 Glutathione S-transferase Gene Family AT3G09270 43.946 2.30e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120888g00002 K00799 - gmx:547584 285.804