Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120887g00024 TGGATTTTGCATAACTGGAATGACGATAATTGCATAAAGATACTAAAAAACTGTAAAGAAGCAATCTCAGGAAACGGTAATAAGAAAGGAGGGAAGGTGATAATAATCGACATTGTGATAAATGAGAAAGAAGATAGAGATGAAATGAGAGAAGTGAAACTCTGCTTTGACATAGTTATGATGACTAGCTTTGATGCTAAAGAGAGAGATGAAAACCATTGGAAACAAATCTTTACTCAAGCTGGCTTCCAAACCTACAAGATTTATCCCAATTTTGGATTTAGGTCTCTCATTGAGCTTTATCCTTAA 309 0.343 WILHNWNDDNCIKILKNCKEAISGNGNKKGGKVIIIDIVINEKEDRDEMREVKLCFDIVMMTSFDAKERDENHWKQIFTQAGFQTYKIYPNFGFRSLIELYP 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120887g00024 102 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 102 IPR016461 GO:0008168
Stsc120887g00024 102 PANTHER O-METHYLTRANSFERASE 1 86 IPR016461 GO:0008168
Stsc120887g00024 102 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 100 IPR029063 -
Stsc120887g00024 102 Gene3D Vaccinia Virus protein VP39 1 102 IPR029063 -
Stsc120887g00024 102 Pfam O-methyltransferase domain 1 84 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120887g00024 Stsc-Chr120887 156995 157303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120887g00024 1 102 Monolignol Biosynthesis Gene Families AT1G51990 36.792 9.76e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120887g00024 - K22588 gmx:100800021 129.028