Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120887g00021 ATGTCTCATTCTTCATTCTCTAACCTCTTCCACTCTCCCACTACTACTTCTTCTACTACTACTCCTCCTCCTTCAAACTCCTTAACAACAACACTTCTTGATTCCATTGTTGCAACTCCAAAACACCCTTATTGTATTTGCAACCATTGTAACCATCTCCTCACTCTCAGTCACCACCACCATCATCCTGGCTATGGTGGCGTAGAGCAAGGAACAAATAATAATGTGCAATCTCATAATCATCATCATCAGCAAGGGACAAGGTGGAGTCCAACGCCGATTCAGTTATTGGTTCTTGAGGAACTGTATAGGCAAGGAACCAAGACTCCATCTGCGGAGCAAATCCAGCAGATAGCCTCTCAGCTGCGACGCTTCGGCAAGATCGAAGGCAAGAATGTCTTCTACTGGTTCCAGAATCACAAGGCCAGGGAGCGCCAGAAGCGCCGCCGCCGCGAGATGGAGGAAAGCATGGCTGCTTCTTCTACCAAAGGGTTGAAAGAGACAGGTTGTGAAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCTAACTGCAATGCTGGACATGCATTTCAGGAATGTATTGAAATATCATCATCAGAAAAGGGATCAAATGGTTGGAATAATAATAATGAATTTGAAGAGAGAGTTTTGAGGAGAAACAGATCTGAGAGACAGGCTAAGTGCCAAAACATGGCTTCCTACTTCAACATTCCCTCCACCATTAACATAGCTGCAACTACTTCTGTAGCTTCACAGATAACTCATAACATTCAACTTCTAAGTAGTACTACTACTCCTCATCATCTTCAACATCATAACAACAACCTCAAACAAAATTTCAATTCCTCCTCGGATGCTCGTACCCTTGAGCTTTTTCCAGTTCACAAGAACAATGATCATGATGAAGGTAATAATGGCATCGTTTCTTTCTCCGAGAGGAAATCCAGCAAGGTTTGTGCCACTGCGTCCATGGAAGAAGTCATGAGCTGTGACCAGTTTTTTGAGTTTCTTCCATTAAGGAACTAA 1026 0.4327 MSHSSFSNLFHSPTTTSSTTTPPPSNSLTTTLLDSIVATPKHPYCICNHCNHLLTLSHHHHHPGYGGVEQGTNNNVQSHNHHHQQGTRWSPTPIQLLVLEELYRQGTKTPSAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRREMEESMAASSTKGLKETGCEVKETKKWASTSNCNAGHAFQECIEISSSEKGSNGWNNNNEFEERVLRRNRSERQAKCQNMASYFNIPSTINIAATTSVASQITHNIQLLSSTTTPHHLQHHNNNLKQNFNSSSDARTLELFPVHKNNDHDEGNNGIVSFSERKSSKVCATASMEEVMSCDQFFEFLPLRN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120887g00021 341 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 72 336 IPR044555 GO:0003700|GO:0099402
Stsc120887g00021 341 MobiDBLite consensus disorder prediction 1 26 - -
Stsc120887g00021 341 Gene3D - 86 154 - -
Stsc120887g00021 341 SUPERFAMILY Homeodomain-like 80 150 IPR009057 -
Stsc120887g00021 341 CDD homeodomain 87 142 IPR001356 GO:0003677
Stsc120887g00021 341 Pfam Homeodomain 87 146 IPR001356 GO:0003677
Stsc120887g00021 341 SMART HOX_1 84 151 IPR001356 GO:0003677
Stsc120887g00021 341 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120887g00021 Stsc-Chr120887 139168 142073 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120887g00021 87 185 Wox Gene Family AT3G18010 57.798 8.72e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc120887g00021 Homeodomain 6.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120887g00021 - - gmx:102666678 267.314