Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120887g00015 ATGCAGTTACAGGTGCTTCAGGAATTGTTTGGAAACGGAATTAAGACTCCATCTACTCTACAAATTCAACACATAGCTTCTCAGCTGCAACGCTTCGGCAAGATCCAAGGCAAGAATGTCTTCTACTGGTTTCAGAATCACAAGGCCATGGAGCGCCGGAAGCGTCGCTGCCATGACTCGGAGGGAACTGCTTCTTCACCACAAGCTTTGAAAGAAAAAGGGTGTGACGCCAAAGAGAGAAAGAAGTGGGCATCATCCACTTCAAAATGCAATGTTGGAGGACATGATTTTCAGTTCGTACCTCAAGCTCGAGAACTTATCCGAGTTGTAGGGAGAATTGTCGACCTGACAACTCGGTTAGGCACGACTTCGAGGAACACCTCCTCACGAGCAGTACCTATGAGTAACTGCCAAGAAGGCTACTCTTCTATAAATACGAAGGCCAAACCCTTATCAGGTATGACATACTTACCCAATTTCTACCACTTACCACCTGCTAAAACTCTTACTGACTTAGGCATCGGAGTGCCTTGCAAGTACAACCCAACCCATTCCAGCGGAGGCTTACGCTTTGGGCTCGTCAGGAAGCAGGCTTTTGGGTTCCTCTCGTAA 612 0.4739 MQLQVLQELFGNGIKTPSTLQIQHIASQLQRFGKIQGKNVFYWFQNHKAMERRKRRCHDSEGTASSPQALKEKGCDAKERKKWASSTSKCNVGGHDFQFVPQARELIRVVGRIVDLTTRLGTTSRNTSSRAVPMSNCQEGYSSINTKAKPLSGMTYLPNFYHLPPAKTLTDLGIGVPCKYNPTHSSGGLRFGLVRKQAFGFLS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120887g00015 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 118 IPR044555 GO:0003700|GO:0099402
Stsc120887g00015 203 ProSiteProfiles 'Homeobox' domain profile. 1 54 IPR001356 GO:0003677
Stsc120887g00015 203 MobiDBLite consensus disorder prediction 55 75 - -
Stsc120887g00015 203 CDD homeodomain 2 55 IPR001356 GO:0003677
Stsc120887g00015 203 Pfam Homeodomain 2 53 IPR001356 GO:0003677
Stsc120887g00015 203 SUPERFAMILY Homeodomain-like 2 55 IPR009057 -
Stsc120887g00015 203 Gene3D - 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120887g00015 Stsc-Chr120887 94689 98028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120887g00015 2 56 Wox Gene Family AT3G18010 67.273 5.36e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc120887g00015 Homeodomain 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120887g00015 - - vum:124827066 116.701