Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120886g00014 ATGCATTTACAGATATTCCAATGGTTGGCAAGTATGCCCGTAGAGCTTGAGGGATATATCCGCCCAGGGTGTACTATCCTGACAATTTTTATAGCCATGCCAAATAATATGTGGATAAATTTACTTGAAAACCCGATGTACTATGTGCGTGATCTTGTTGCTCCTGGAAAGATTCTATCTGCAAGAGGCAATGCACTAATTCATCTGAATGATATGGTCTTCCGCATTATGAAAGATGGAACGTCTGTGACAAAAGTCAAGGTAAACGCAAAGGCACCAAGACTTCACTATGTTCATCCCACATACTTTGAGGCTGGGAAACCTATGGAGTTTGTTGCTTGTGGAAGTAACTTGATGCAGCCTAAGTTTCGGCTTCTTGTATCATTTTCTGGGAAGTATCTGAAGTGTGAATATTGTGTTCCATCTCCACATAACTGGACTGGAAACAATATTTCTTGTTCTTTCGAGAATCAGTTATACAAGATATATGTCCCTCATACAGAGGAAAGTCTCTTTGGGCCTGCATTTATTGAGGTGGAGAATGAGTCTGGTTTATCAAACTTCATTCCCATCCTCATTGGAGACAAAGAAGTTTGCAGTGAGATGACGGCGTTGCAGCAAAGATTAGACGAGTCTCTTCATTCTAAACGATTCCAGTCTACATCTGATGGTTCTATCTGCAGCTTGTGTGAAGATTTTGCACATAGTCACTCATTATCAGACTTGCTTGTAGATATAGCATGGTTGCTTAAGAACCCAACCTCAGAAAATTTTGAGAGAATAATGACGGCTTCACAAATTCAAAGATACTGTTACTTGTTGGACTTTCTTATATGCAATGATTCATTACTCATTTTGGAAAAAATATTACCAAAGTTGTTGATCTTGACAGAAAGCTTGAAATCAAATATTGTGATTAGTAGGACAAGTGATGTTGACTTGACACGACTACTGAATTGCATGCATCTTGCAAGAGATGTTATTTATCAGAATCATCAGAAAGGCAGAGGCATAGTTGTGCATTCTGAAACAGAAGGCTTTAGGATTGCTAAAACCTGCACCTTAGACAGCTTGCCATCAGTTTCAGGGATAAAAAGTCAGGATGTTCTTTCCAGAACGGATTCCAAGTTGGGAATAATGACAAGCCCAACATCTAATGACAAAACTGATAGGATACCACTTTTGAAGAGGGAGATTATAATGAACATGGAAGAGTTGCCTAAACAGTCCTGCCGGCGATATGTCGGTAGGGGATACTTGAACTCACGACCAGCAATAGTTATGATTGCTTCGGTTACTATTTGTCTTGGGGTATGTGTAGCCGTCCTTCACCGGGGGAGAGTTAGTGAGTTTGCTGTATCCATTAGAAGGTGTTTGTTTAACTCTTAG 1389 0.3988 MHLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNNMWINLLENPMYYVRDLVAPGKILSARGNALIHLNDMVFRIMKDGTSVTKVKVNAKAPRLHYVHPTYFEAGKPMEFVACGSNLMQPKFRLLVSFSGKYLKCEYCVPSPHNWTGNNISCSFENQLYKIYVPHTEESLFGPAFIEVENESGLSNFIPILIGDKEVCSEMTALQQRLDESLHSKRFQSTSDGSICSLCEDFAHSHSLSDLLVDIAWLLKNPTSENFERIMTASQIQRYCYLLDFLICNDSLLILEKILPKLLILTESLKSNIVISRTSDVDLTRLLNCMHLARDVIYQNHQKGRGIVVHSETEGFRIAKTCTLDSLPSVSGIKSQDVLSRTDSKLGIMTSPTSNDKTDRIPLLKREIIMNMEELPKQSCRRYVGRGYLNSRPAIVMIASVTICLGVCVAVLHRGRVSEFAVSIRRCLFNS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120886g00014 462 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 56 278 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120886g00014 Stsc-Chr120886 49524 52988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120886g00014 4 456 SBP-box Gene Family AT5G18830 43.011 4.05e-113 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120886g00014 - - gmx:100819905 706.442