Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120884g00011 ATGATGAGGAGGAGATCCAGGATCAGAAGGGAATGGACGGTAGCGGTGGTGCAGGCTAGCGGAGAGATGGAGTCATTGGAGGCGGCAGGGAAGCAGGAGATAATGCGGAGGACAGGGGTGGCAGCACGTGACCTCAGGAGGCTGGTGTCCTCCTCCTCCAGCAGGAGCAGGACCACCATAGTTGGCAGAGAGTGTAGCATAGTCATCAACTTAGACCACGTCAAAGCCATCATCACTGCAAATGAAGCTCTCTTCATGAACTCCAAAGACCCCTCTCTCATCCCCCTTCTCCAAAACCTTCATAACCGCATCATCCTCCCTCCCTCATCACCAATCAAGATCCTTCCATTTGAGTTCGTGGCACTCGAGGCATGCCTTCTGGCTGCTTCCACTTCCTTGCAAAACGAGGCTAATATATTGGAGCAGGAGTCTCATACCGCCTTGGATAACCTCACTCTGGAGATTTGTACTCTGAATCTAGAGCGCGTTCGCCAAATTAAGAGTCGCTTGCTTGCCATTACTCGTCGTGCTCAAAAGGTTAGGGATGAGTTAGAGAACTTGCTGGATGATGATGAGCACATGAGTGAGATGATTACTACTGAAATAACAATGGAAGAATCTTGGGTGAGCAAGAAAAGTAATGTAGAGGAGGTTGAGATGCTGTTGGGAGCATACTTTGTGGAAATCGGTGGAACTCTCAACAAATTATTCAGTGTGAGAGAGGAGGTGGAAGAGACAGAGGAGTACATAAACGGGATGCTGCATGAGAAAGAGAACAAGCTGCTGCAAATGGCAGTGAGGGTGGGCACGGCAACTGTGATAATGGAGGCCTTCATTACGGTCTTGGGTATTTTGGCCATTAACATTAACATTGAGCTGTTTAATAAACATGGCTTGTTCCTATGGATAACAGGTGGCTGTGTTGCTTCTTCCATATTCCTCTATGTCTCTGCCATTCTTTGGTACAGGCACAAACACTTGCTGGATTAG 990 0.4818 MMRRRSRIRREWTVAVVQASGEMESLEAAGKQEIMRRTGVAARDLRRLVSSSSSRSRTTIVGRECSIVINLDHVKAIITANEALFMNSKDPSLIPLLQNLHNRIILPPSSPIKILPFEFVALEACLLAASTSLQNEANILEQESHTALDNLTLEICTLNLERVRQIKSRLLAITRRAQKVRDELENLLDDDEHMSEMITTEITMEESWVSKKSNVEEVEMLLGAYFVEIGGTLNKLFSVREEVEETEEYINGMLHEKENKLLQMAVRVGTATVIMEAFITVLGILAININIELFNKHGLFLWITGGCVASSIFLYVSAILWYRHKHLLD 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120884g00011 329 CDD Mrs2_Mfm1p-like 14 327 IPR039204 -
Stsc120884g00011 329 Coils Coil 170 190 - -
Stsc120884g00011 329 Gene3D - 2 88 - -
Stsc120884g00011 329 Gene3D Magnesium transport protein CorA, transmembrane region 90 261 - -
Stsc120884g00011 329 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 328 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120884g00011 Stsc-Chr120884 60197 61535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120884g00011 16 329 MRS2 Gene Family AT3G19640 37.585 2.22e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120884g00011 - K16075 gmx:100819578 281.182