Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120883g00009 ATGCTGAAGCTTGAGGAACTGTGTGGCACCTCCGTTAGGCACCTCCGCTGCCAGTTACCAGCGGAAGACCTCGACGCCTTGGTATCCATCACCTCCGACGAGGACCTAGCCAATCTAATCGAGGAATACGACCGTGCCGCCACATCTTCCCTGAAGATCAGAGCCTTTCTCTCGCAACCGAAATCTACGAACAAACTCTCCGTCATTCCGCCGCCTTCTCTACATTCGAGATCGGCGTATTCCTCATCTTCTTCGTCAGCTTCGGCCTCCTCGTCATCATCGTCGCCTTCTTCATCTCCCTATTGTAGCGTTGCTGGTACTAGTGGAAGTGGTTACCATGGCTACCATGGTTTCAGTCCTAGACAGAGTTATAAGGTGGCGGAGCCATGCATCCGTCAGATGTGGCCAGCCGCTGGCGGTGGGAAAACCGGTGGAAGAAATATTCCAGTGCCGCGTGACGGTTATGGTGGTCAGAAAAACACCGGCCACTTGTGTCTTATCTATAATGGCAACCACTGGCAATAG 525 0.5314 MLKLEELCGTSVRHLRCQLPAEDLDALVSITSDEDLANLIEEYDRAATSSLKIRAFLSQPKSTNKLSVIPPPSLHSRSAYSSSSSSASASSSSSSPSSSPYCSVAGTSGSGYHGYHGFSPRQSYKVAEPCIRQMWPAAGGGKTGGRNIPVPRDGYGGQKNTGHLCLIYNGNHWQ 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120883g00009 174 MobiDBLite consensus disorder prediction 66 100 - -
Stsc120883g00009 174 PANTHER OS05G0427100 PROTEIN-RELATED 1 108 - -
Stsc120883g00009 174 SUPERFAMILY CAD & PB1 domains 2 66 - -
Stsc120883g00009 174 Pfam PB1 domain 2 57 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120883g00009 Stsc-Chr120883 46535 48349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120883g00009 1 149 MAP Kinase Kinase Kinase AT5G57610 29.936 1.09e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120883g00009 - - lang:109349167 152.14